Clostridium felsineum DSM 794: CLFE_027950
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Entry
CLFE_027950 CDS
T08216
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cfb
Clostridium felsineum DSM 794
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfb03019
]
CLFE_027950 (yhaM_1)
Messenger RNA biogenesis [BR:
cfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLFE_027950 (yhaM_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
URZ16748
LinkDB
All DBs
Position
complement(2937541..2938509)
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AA seq
322 aa
AA seq
DB search
MELKTISELEAGNRIDGFFIIKSVEKRISSNNKKYLDFTFGDKTGDINGKLWDASDSDED
TFVNNILVKVRGTVIEWQNNLQLKIDKIRKTVESDEVKVSDFVPSAPYLADDMYSTILEY
VEKVKNDDIKNILYDVLESAGEKIMYWPAAKKNHHSVRSGLLYHTSTMLKAGEKISEVYT
FLNTDLIYAGVILHDMAKLEEMESSELGIVTDYSIEGQLLGHIILGVEKVRNSAKKVGAD
KEISMMLEHMVLSHHYEAEYGSPKKPMFPEAEVLHHLDDMDASMFDMKKALETTDPGEMS
DAIWSLDRRRIYKSKFDKNEDK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttggaattaaaaactattagtgaactagaagcaggaaatagaatagatggcttctttata
attaaatcagtggaaaaaagaatttcttctaataacaagaagtatcttgattttactttt
ggtgataaaacaggagatataaatggaaagctttgggatgcatctgattcagacgaggat
acctttgtaaacaatattcttgtaaaggtaaggggaacagtaattgaatggcagaataac
cttcaattaaagatagataaaataagaaaaactgtagagtcagatgaagttaaagtatct
gattttgttccgtctgcaccataccttgcagatgatatgtattcaactatattagagtat
gtagaaaaagtaaaaaatgatgatataaagaatattctttatgatgttttggagagtgca
ggagagaaaataatgtattggcctgctgcaaaaaagaatcatcattcagttcgttcaggg
cttttatatcatacatcaactatgcttaaggcaggagaaaaaataagtgaggtatataca
ttcctaaatacagatttaatatatgcaggtgtaatacttcatgatatggcaaaactagag
gaaatggaatcttcagagcttggaatagttactgattatagtatagaaggacagctttta
ggtcatataattttaggagttgaaaaggttagaaattcagctaaaaaggtaggagcagat
aaggaaatatctatgatgcttgaacacatggtactatctcatcattatgaagccgaatac
ggaagccctaaaaaaccgatgtttccagaagcggaagtattgcatcatttagatgatatg
gatgcgtctatgtttgatatgaaaaaagcacttgaaacaacggatcctggagaaatgtca
gacgcaatatggtctttagatagaagaagaatatataaatcaaaatttgataaaaatgaa
gacaaataa
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