Clostridium felsineum DSM 794: CLFE_027960
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Entry
CLFE_027960 CDS
T08216
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cfb
Clostridium felsineum DSM 794
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_027960 (addA)
Enzymes [BR:
cfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLFE_027960 (addA)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CLFE_027960 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_12
DEAD
AAA_30
T2SSE
Motif
Other DBs
NCBI-ProteinID:
URZ16749
LinkDB
All DBs
Position
complement(2938557..2942306)
Genome browser
AA seq
1249 aa
AA seq
DB search
MGKTKWTEEQKEAIDTRNCNLLVAAAAGSGKTAVLVERIVKIITDEENPVDIDRLLVVTF
TNAAASEMRERIGDAIVKKLSEKPNSRIIQKQLALIGKSKITTIHSFCLNVIKNNFHMLD
LDPDFRVGDETEITLLKNETLEELFEDKYLQAEYTLKGINKNNNSIEFLKLVESYCSNKN
DETLFNMVMNLYNFSMSNPKPHEWLKSAAEKFNVNEDFKFGESDLAKVLIKNIQIQLKGN
KSQYEEAINIINTCPSIESYRENFQSELSMLENLISASDSYEKFYEELKNVQFKTLKRCP
KDADKEKQKLVRDIRDGIKKSLSKISDDILSQNNEDIKNQFKELYPLMKTLSELVIEFDV
RYKDKKKKRGIIDFNDFEHMCLSILVKSDDKGNIVPSETALKMRDKYEEILIDEYQDSNM
VQEVILGTISKKDTENPNLFMVGDVKQSIYRFRQANPGIFLDKYNSYKNEKGKKDRKVLL
YKNFRSRKEVLDAVNFIFKQIMSVNIGELDYNDNESLNLGASYEKVEENSISHSVELNII
EKSEENDEVKENNEDEETVDNIMLEARLIGRRILELKENFKVLDKNTNEYRKTEFKDIVI
LLRSTKGWANVFLDELKNMGIPVFADANSGYFDAPEIKTMLSLLKIIDNPRQDIPMAAVL
KSPIGGFTVEDLIDIKLIEGDTFYDKLKRVEENGEDELSIKIKSFLKRLQVWRKEAIYTP
IDEFIWYLYTDTGYYGYVGAVSGGIQRQANLKMLFQRAKVYSETSYKGLFNFINFINKLK
LTSGDMGSAKILGENENVVRIMSIHKSKGLEFPVVFVGGVGKNFNLMDINNPVIFHNNLG
FGPEYVDYKKRISHKTLAKEAIKTRIKLETLSEEMRILYVAFTRAKEKLIIVGAAKDIKK
SVFKWAVNLRSKQNKISEDYILKSKSFLDWIASAVIRHKDAENLRDIIDTDDIETLIYDN
SKWQVNLLDRDDILSFNEVLLENEKNINEKLEKFYKKLDIIKNSPYESEYVEKIEDRLQF
KYQYDRATELPSLLSVTELKRSSNEDKEGVAAANIYTPQLLQKPLFLEGVKKLSPAKRGT
AVHSVMQHLNFNDIRSDISLKNISHQIDDMVFRKILTEKQAEVVNANKILKFFTSDVGNR
TINAEKVYREFPFQIRVKSTEIYKDLPDTYNDENIVVQGIVDLFFEENNEIVLLDYKNDY
VNDENLDEIIKKYTYQINYYKRALETITGLRVKEKYLYLFYTGDTIKIE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaactaagtggacagaagagcaaaaagaggctatagatactagaaattgtaac
ttacttgtagcagcagcagcaggatccggaaaaacagctgttcttgttgaaagaatagta
aagataataacagatgaggaaaatccagttgatatagatagacttttagtagttaccttt
actaatgcagcagcatctgaaatgagagagaggataggtgatgctatagttaaaaagctc
tcagagaagcctaattcaagaataattcaaaaacaattagcgctgattggaaagtctaaa
attaccacaatacactcattttgtctaaatgttataaaaaataattttcacatgcttgat
ttagatcctgattttagagttggggatgaaacagaaattacattacttaaaaatgaaacg
ctagaggaattatttgaagataaatatcttcaggccgaatatacgttaaagggaataaat
aaaaataacaatagcatagagtttttaaaacttgtagaaagctattgcagtaacaaaaat
gatgagactttatttaatatggttatgaatctttataatttttctatgagtaatccaaag
cctcatgaatggcttaaaagtgcagcagaaaaattcaatgtaaatgaagattttaaattt
ggagagtctgatttagccaaggttttaattaaaaatatacaaatacaattaaagggaaat
aaaagccaatatgaagaggcaataaatataataaatacatgtccttctattgagagttat
agagaaaactttcagagtgaactttcaatgcttgaaaatttaatttctgcatcagatagt
tatgaaaagttttatgaagaacttaaaaatgtgcagtttaaaactttaaaaagatgccct
aaggatgcagataaagaaaaacaaaaacttgtgcgtgatataagggatggcattaagaaa
agtttgtccaaaataagcgacgatattctttcacaaaataatgaagatataaaaaatcag
tttaaagaactatatcctcttatgaaaaccttaagtgagcttgtaatagaatttgatgtt
agatataaggataaaaagaaaaaaagaggaataattgattttaatgattttgagcatatg
tgtttatcaatacttgtaaaaagtgatgataaaggaaatatagtgccttctgaaactgca
ctaaaaatgagagataaatatgaagaaatcttgatagatgaatatcaagatagtaatatg
gttcaagaagttatattaggaactatttcaaaaaaagatactgaaaatcctaatttgttc
atggtaggagatgtaaaacaaagtatatatagatttaggcaagctaatcctggcatattt
ttggataagtataatagttataaaaatgaaaagggcaaaaaggataggaaagttctttta
tataaaaatttcagaagtagaaaagaagttcttgatgcagtgaattttatatttaagcaa
ataatgtcagtaaatattggagaacttgattataatgataatgaaagcttaaatttaggt
gcaagttacgagaaagtggaagaaaactcaatatctcattctgtggaattaaatataata
gaaaaaagtgaagaaaatgatgaagtgaaagagaataatgaggatgaagagaccgtagat
aatataatgcttgaggcaaggcttataggaagaagaattttagagcttaaagaaaatttt
aaggtacttgataaaaatacaaatgaatatagaaaaacggaatttaaagatattgtaatt
ttattaagatctacaaaaggttgggcaaatgtttttttagatgaacttaaaaatatggga
ataccagtttttgcagatgcaaattcaggatattttgatgcaccggaaattaaaactatg
ctatcgcttcttaagataattgataatccaagacaggatatacctatggcagcagtttta
aaatcacctattggaggatttacagtagaagatttaatagacataaagcttattgaggga
gataccttttatgataaacttaagcgagtagaagaaaatggggaagatgagctttcaata
aagataaaaagctttctaaaaagacttcaagtgtggcgaaaagaagcaatatacacacct
atagatgaatttatatggtatctttacacggatactggatattatggttacgttggagcc
gtaagtggaggaattcagcgtcaagcaaatttaaaaatgttatttcaaagggctaaggtc
tatagtgaaactagttataaggggttgtttaattttataaattttataaataaacttaaa
ttaactagtggtgacatgggaagtgcaaaaattttaggtgagaatgaaaatgtagttaga
ataatgagtatacacaaaagtaaaggtcttgaattccccgtagtttttgtgggcggcgtt
ggaaaaaactttaatctaatggatataaataatcctgtaatttttcataataaccttgga
ttcggtccagaatatgtggattataaaaaaagaatttcacataaaactttggcaaaagag
gctataaaaactaggataaagctagaaacgctttcagaagagatgagaattctatatgtg
gcttttacaagagcaaaagaaaagcttataatagtaggcgcagctaaagatataaaaaag
tcagtttttaaatgggccgtgaatttaagaagtaaacaaaataagatatcagaagactat
atacttaaaagtaagagctttttagattggatagccagcgcagttatacgtcacaaggat
gctgaaaatttaagagatataatagatactgatgatatagaaactttaatttatgataat
tctaaatggcaagtgaatttactagatagagatgatatactaagttttaatgaagtatta
ttagaaaatgagaaaaacattaatgagaagttagaaaagttttataagaaattagatatt
ataaaaaattcgccttatgaaagtgaatatgtagaaaaaatagaagatagacttcagttt
aaatatcaatatgatagggctactgagcttccatcgctgctttcagttactgaacttaaa
agaagttcaaatgaagataaagaaggtgtagctgcagctaatatttatacgcctcagctt
ttacaaaaacctcttttccttgagggtgttaaaaaattatcgccagcaaagaggggaaca
gcagtacactcagtaatgcagcatttaaattttaatgatataagaagtgatataagctta
aaaaatataagtcatcaaatagatgacatggtttttagaaaaatattaacagagaagcag
gctgaagttgtaaatgcaaataaaattttgaagtttttcacaagtgatgtaggaaataga
actattaatgcagaaaaagtttatagggagtttccatttcaaataagagttaaaagtaca
gaaatatataaggatttgccagatacttataatgatgaaaacatagtagttcaaggaatt
gtagatttattttttgaagaaaacaatgaaatagtgcttttagactataaaaatgattat
gtaaatgatgaaaatttagatgaaataataaaaaagtatacttatcaaattaattattat
aaaagagctcttgaaactataacaggattaagggtaaaggaaaaatatctttatttgttt
tatacaggtgatactattaaaatagaataa
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