Clostridium felsineum DSM 794: CLFE_037650
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Entry
CLFE_037650 CDS
T08216
Symbol
helD_2
Name
(GenBank) DNA helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03420
Nucleotide excision repair
cfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLFE_037650 (helD_2)
03430 Mismatch repair
CLFE_037650 (helD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_037650 (helD_2)
Enzymes [BR:
cfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLFE_037650 (helD_2)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLFE_037650 (helD_2)
MMR (mismatch excision repair)
Other MMR factors
CLFE_037650 (helD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
Viral_helicase1
PhoH
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
URZ17710
LinkDB
All DBs
Position
complement(4024186..4026351)
Genome browser
AA seq
721 aa
AA seq
DB search
MERDERNSTGDINRLIEEKNKAEEFESEYLKLKGVIEIINKEIVQYVNKKKEISQYILDE
REKNLEDYADDEDKVIEYFDHERYVKEETFNIIYKRLKELNILLSSPYFGKIDFEEENFG
EEKIYIGRFGVTPIGSYEPLIVDWRAPIASIFYTSQLGKATYKAPAGNIEVDIKKKRQYI
IKKGKLDGFFDSEVDVKDEILQMVLSKNTGDKLRDIIMTIQAEQDNIIRQERNKISVVNG
VAGSGKTTIALHRVAFLLYNYRNILQDKILILGPNPVFMEYIKNVLPSLGEENVRQQTFI
DFALDILPLDTYDIMSTQDYMEKILVGDSEFIKEVKHKTSDEYIKELDNLIYELEKEYRD
NIKDVWYGDRKAVAIDEIEELFTEYYKAMPLFRRTQKIKRIIFSKLKDIRDEEVRKIQKD
YDEAIKSSSQEELNEQGNKLLFQKKLGIRKAIKKVMDAKKALTWLQDADILRIYNRLNHD
KLYTIDDTAPLIYIRIKLEGIKLQREIKHVVIDEAQDYSKLQFMVIKKLTNCLGMTVVGD
SNQRLIPRFEENIAMEKMDDIFENMDFEMFRLNKSYRSTKEIMEYANYFINDTSIIPLVR
DGEKVEKITLASEDEFTDTVVNSIKDMKKEGIETIGIICENMEDTKYFGKLLKTKTHINI
IEKEDQIYIGGETVMPSYFAKGLEFDGVIIVSRHEKKNLDRVLYVMATRALHKLCHINIS
M
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagatgaacgaaacagcactggagacattaacagactaattgaagaaaaaaat
aaagctgaagaatttgaaagtgaatacttaaagttaaaaggtgttattgaaattataaat
aaggaaatagtccagtatgtaaataagaaaaaggaaatttcacaatatatactagacgaa
agagagaaaaatcttgaagattacgcagatgatgaagataaggtaatagaatactttgat
catgagcgctatgtaaaagaagaaaccttcaatataatatacaaaaggcttaaggagctt
aatatattattatcatcaccttattttggaaaaattgattttgaggaagaaaattttggt
gaagaaaaaatatatataggaagatttggagttacacctattgggagttatgaaccatta
attgtagattggagagcaccaatagcatcaattttttatacttctcagcttggcaaggca
acatataaagcgcctgctggtaatatagaggtagatataaagaagaagagacaatatata
ataaaaaaaggtaaacttgatggtttttttgattctgaagttgatgttaaggatgaaata
cttcaaatggttctaagtaaaaacacgggggataagctccgtgatattataatgactata
caggcagaacaggataatattataaggcaggaaagaaataaaatttctgtggtaaatgga
gttgcgggaagtggtaagacaacaattgcacttcatagagttgcttttcttttatataat
tacagaaatatacttcaagataaaattttgattttgggacctaatcctgtttttatggaa
tacataaaaaatgtacttccaagtcttggagaggaaaatgtaagacagcaaacgtttatt
gattttgctctcgatatacttccacttgatacttatgatattatgagtactcaagattat
atggaaaaaattcttgtgggagatagtgaatttataaaggaagtaaaacataaaacctct
gatgaatatataaaagaactagataatctaatttatgaactagaaaaagagtatagagat
aatataaaggacgtatggtatggtgatagaaaagccgttgctatagatgaaatagaggaa
ctgtttactgaatactacaaagctatgcctctttttagaagaacacaaaaaataaagaga
ataatttttagtaagcttaaggatataagagatgaggaagtaagaaaaatacaaaaggat
tacgatgaagcgattaaaagtagtagtcaggaagagcttaatgaacaaggaaataaactt
ttatttcagaaaaagttaggaatacgcaaagctataaaaaaggttatggatgctaaaaaa
gctctaacttggcttcaagatgcagatatacttagaatatataataggcttaatcacgat
aaattgtatacaatagatgatacagcaccacttatatatattaggataaagcttgaaggt
ataaaacttcagcgtgagataaaacatgtggttatagatgaagcacaggattatagtaaa
cttcaatttatggtaataaaaaagctcacaaattgccttggaatgactgtcgttggagat
tcaaatcagagattaattccaagatttgaagaaaatattgccatggaaaaaatggatgat
atatttgagaatatggattttgaaatgtttaggcttaataaaagttatagatcaacaaaa
gagataatggaatatgctaattattttattaatgatactagtataataccattagttaga
gatggggaaaaggttgaaaaaataacgctagctagtgaagatgagtttacagatactgta
gtaaattctataaaagatatgaaaaaagaaggtattgaaaccataggaattatatgtgaa
aacatggaggataccaagtatttcggaaaattacttaagacaaaaacacatataaatata
atagagaaggaagatcagatatatattggtggagaaacagttatgccttcttactttgct
aaaggattagagtttgatggtgtaattattgtaagtaggcatgaaaagaaaaatttagat
agagttttgtatgtaatggctacaagggcgcttcataagttatgccatattaatatttct
atgtaa
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