Clostridium felsineum DSM 794: CLFE_040000
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Entry
CLFE_040000 CDS
T08216
Symbol
uvrB_3
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLFE_040000 (uvrB_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_040000 (uvrB_3)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLFE_040000 (uvrB_3)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLFE_040000 (uvrB_3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Phage_Mu_Gp48
AAA_5
AAA_22
ApoLp-III
Adenylsucc_synt
UB2H
DUF87
DUF7768
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
URZ17945
LinkDB
All DBs
Position
complement(4282179..4284200)
Genome browser
AA seq
673 aa
AA seq
DB search
MFDGDGAMGTFKINSDFKPTGDQPQAINSIVKGINNADKWQTLLGVTGSGKTFTMANIIE
KVQKPTLVIAHNKTLAAQLCGEFRDFFPDSAVEYFVSYYDYYQPEAYVAQTDTYIEKDAS
INDEIDKLRHSATSALFERRDVIVVASVSCIYGLGNPEEYKKLSISLRTGMNKDRDEVLK
KLVEMQYERNEINFVRGTFKVKGDTIDIFPAGSTNKAIRVEFFGDEIDKIKEFDVLTGNT
ISSLKHAVIFPASHFATSSDKMEAAIGQIEVELEERLKELNSDDKLLEAQRLKQRTNFDI
EMMREVGYCTGIENYSRIMDGRQKGEPPKTLIDYFPDDFLMFIDESHVTLPQVKAMYGGD
RSRKNSLVDYGFRLPSAYDNRPLKFDEFEKKINQVVFVSATPADYELEHSENIAEQVIRP
TGLLDPEIEVRPTKGQIDDLYAEIKKTIEKGYRILVTTLTKKMAEDLTDYLKDLGIKTTY
MHSDIDTLERMKIIKDIRTGEFDVLVGINLLREGLDIPEVALVSILDADKEGFLRSERSL
IQTIGRAARNAASRVVMYGDKITDAMGKAISETKRRRKIQMDYNEKNGITPTTIKKAVRD
VIGISEVAEGKAEYKTMDEAVKADSKNLDKLIKEFEKEMKEAAKELQFEKAAYFRDKVNE
LKKKLNENKEVMK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatggagatggtgcaatgggtacatttaaaataaattcggattttaagcctaca
ggagatcagccacaggctataaatagcatagttaaaggaataaataatgctgataaatgg
caaactcttttaggagttactggttcaggaaaaacttttacaatggcaaatataatagaa
aaagttcaaaaacctacattggttattgcacacaataagactttggcagctcagttatgc
ggtgaatttagagattttttccctgatagtgcagttgagtattttgtatcttattatgat
tattatcaaccagaggcatacgtagcacagacagatacatatatagagaaggatgcgtct
ataaatgatgaaatagataaacttaggcattcagctacttctgctctttttgaaagaagg
gacgttattgttgttgcttcagtttcatgtatatacggcttaggtaacccagaagagtat
aaaaagttatccatatctttaagaacaggaatgaataaggacagggatgaagtgttaaag
aagctagttgaaatgcaatatgaaagaaatgaaataaattttgtaagaggtacctttaaa
gtaaaaggtgataccatagacatttttccagcgggttctacgaataaggcaataagagta
gagttttttggagatgaaatagataaaataaaagaattcgatgttcttacaggaaataca
atatcatcattgaagcatgcggttatttttccagcatctcactttgcaacctcaagtgat
aagatggaggctgcgataggtcagatagaagttgaattagaagaaaggcttaaagaatta
aattctgatgacaaacttcttgaagctcagagattaaagcagagaacaaattttgatatt
gaaatgatgagagaagttggttattgtacaggaatagaaaattactctagaattatggac
ggaaggcaaaagggagagcctcctaagacattgatagattatttcccagatgattttctt
atgtttatagatgaaagccatgttacgcttccacaagtaaaagccatgtatggaggagat
agatcaaggaaaaattctttagttgattacggttttagattaccaagtgcttatgacaat
agacctctaaagtttgatgagtttgagaaaaaaataaatcaggtagtttttgtaagtgct
accccagctgattatgaactggaacattcagagaatatagcagagcaggttataagaccg
acaggactacttgatccagaaatagaagtgagacctacaaaaggtcaaatagatgatttg
tatgctgaaataaagaagacaatagaaaagggatacaggattttagtcacaacacttacg
aaaaaaatggcagaggatttaacagattatcttaaagatttaggcataaaaactacttat
atgcattcagatatagatactttagagagaatgaaaataataaaagatataagaacagga
gaatttgatgttttagtaggaataaatcttttaagagaaggtctagatataccagaggtt
gcattagtttctatacttgatgctgataaagaaggttttttaagatcagaaagatcactt
attcagactataggaagagctgcaagaaatgctgcaagtagagtagtaatgtatggtgac
aaaataacggatgctatgggcaaggcaataagtgaaacgaaaagaagaagaaaaattcag
atggattacaatgaaaagaatggtataacacctactacgataaagaaagcagttagagat
gttataggtataagtgaggtagcagaaggaaaagcagaatataaaactatggatgaagct
gtaaaggctgatagtaaaaatttagataagttaataaaagaatttgagaaggaaatgaaa
gaagcagcaaaagaacttcaattcgagaaagcagcatactttagagataaagtaaatgag
cttaagaaaaaattaaatgaaaacaaagaggtaatgaaataa
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