Clostridium felsineum DSM 794: CLFE_042540
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Entry
CLFE_042540 CDS
T08216
Name
(GenBank) CC-adding tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLFE_042540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfb03019
]
CLFE_042540
Enzymes [BR:
cfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CLFE_042540
Messenger RNA biogenesis [BR:
cfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CLFE_042540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
DUF6932
Motif
Other DBs
NCBI-ProteinID:
URZ18199
LinkDB
All DBs
Position
complement(4578607..4579977)
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AA seq
456 aa
AA seq
DB search
MNDIIRLIKDIITEVDIKAYVVGGYVRDKLINSKNEPEDLDIVFEDDFEGILDILKDKGA
KISLIKKDLNVYRASYKGCLVDISRIKGKNIEEDLNKRDFTINAIALDVKDNKIIDPFKG
RLHIKRRIIQVVNENSLKEDAVRILRGVRFYIKYGMHFNGYTEEYIREEAKNIMKFPKDR
VLDEIMHSIHNDESGVFFEVMDQYMVLKNILPYTEELKTVGKCKYHLVDAFTHMNTAYRV
FKDLKKGYLKVDNLNLERFEKKIGLYDESDYLAFAVFVHDIGKYVSYKKEGECISFKGHD
EKGLEIIEKVCDELKFPIEGKKIVSSVVRNHMYPLMIFKTEKEARKLKEYEFFKNFDKYI
PHIIVASFCDVYATKIYMDHGNEKASFIEFISELMLKYNKFKNLKINRLLDGNNLIDLGL
NGNDIGDMINKLDKFIYLEGSKTREEQQKFVLKMIK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgatattattagactaataaaagatataattacagaggtagatataaaagcttat
gtagttggtggatatgtaagagataaacttattaattctaaaaatgaaccggaggactta
gatattgtttttgaagatgactttgaaggtatactagatatacttaaagataagggtgca
aagataagccttataaaaaaggatttgaatgtatatagagctagctataaaggttgttta
gtagacatatctagaataaaaggtaagaatatagaggaggatttaaataaaagagatttt
acgataaacgcaatagctttagatgtaaaagataataagataatagacccatttaaggga
agattacatattaagagaagaattatccaagtagtgaatgaaaatagtcttaaagaggat
gctgtgaggatacttaggggagtaagattttatataaaatatggcatgcattttaatgga
tatactgaggagtatattagagaagaagcaaagaatataatgaagtttcctaaggataga
gttcttgatgaaattatgcacagtatacataatgatgaaagtggagtgttttttgaagta
atggatcagtatatggttttaaaaaatatacttccatatacagaagaattaaaaaccgta
gggaaatgtaaatatcatcttgtggatgcctttacacatatgaatacagcttatagagtt
tttaaggacttgaaaaagggatatttaaaagttgataatttgaatttagagagatttgag
aaaaaaattgggttatatgatgaatcagattatttagctttcgctgtttttgttcatgac
ataggtaagtatgtaagttataagaaagaaggagaatgtataagcttcaagggacatgat
gaaaagggattagaaataattgaaaaagtgtgtgatgaattaaaattccctattgaagga
aaaaagatagtaagctcagttgttagaaatcacatgtacccgcttatgatttttaaaaca
gaaaaagaagctagaaaattaaaagaatacgagttctttaagaattttgataaatatatt
ccacatattatagtggcatccttttgtgatgtgtatgctacgaaaatttatatggatcat
ggaaatgaaaaagctagttttatagaatttatttctgagctaatgcttaagtataataaa
tttaaaaacttaaaaataaatagactcttagatggaaataacttgattgatttgggttta
aacggaaatgatataggtgatatgatcaacaaacttgacaaatttatttatcttgaagga
agcaaaactagagaggaacaacaaaaatttgtcttaaaaatgataaagtag
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