Corynebacterium flavescens: CFLV_02040
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Entry
CFLV_02040 CDS
T05018
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cfc
Corynebacterium flavescens
Pathway
cfc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFLV_02040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfc03021
]
CFLV_02040
03400 DNA repair and recombination proteins [BR:
cfc03400
]
CFLV_02040
Enzymes [BR:
cfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFLV_02040
Transcription machinery [BR:
cfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFLV_02040
DNA repair and recombination proteins [BR:
cfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFLV_02040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
APT86090
UniProt:
A0A1L7CJP2
LinkDB
All DBs
Position
439714..443709
Genome browser
AA seq
1331 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKNLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVQDDTEAEIAERAAKLESD
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWTTFLKLAPKQMIIDETI
YDELVDRYEDYFTGGMGAEAIQTLIRNFDLEAEAEDLREIIRNGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMNKTAEELGGE
GRYTPADENGPEKGVYSSYAEALMARDRGVVGLQAPIKVRIDHLRPPEDIEAQFFPDGWH
KGESWLAETTLGRIMFNELLPWNYPYLEGVMVRKGGSKDTVLLGDVVNDLAIKYPMITVA
QVLDKMKDAGFYWATRSGVTITMSDVLVLPNKEEILESYEKDAQTIERKYWEQGALTERE
RYDRLVELWKHATDTVGNAVEKLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGVRIPLGTEVAPGKYEVHELWETSASGRVVATDVKDSHGEIVAQAGEDLTEELT
DKLVNAGVLDIKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDNVVYEKLSKRQGLAQVRRPMESNPDAMIERSLRDGDHVTTGERLMRGAADPHDVLE
VLGRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIDAGSTDFLPGTLIDL
SEAKQINATQVAEGGEPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
KLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLDEDFNF
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaatctcttcgacgagctccgcatcggtctggccaccgctgatgacatt
cgtcgctggtcaaagggcgaggttaagaagcccgagaccatcaactaccgcaccctgaag
ccggagaaggacggcctgttctgcgagcgcatcttcggacctacgcgcgactgggagtgt
gcttgtggcaagtacaagcgcgtccgttacaagggcatcatctgcgagcgctgtggcgtc
gaggtcaccaagtccaaggtgcgccgcgagcgcatgggccacatcgagcttgccgctcct
gtgacccacatctggtacttcaagggcgttccctcgcgcttgggctacctgttggatctc
gctcctaagaacctcgagcgcatcatctacttcgccgccaacatcatcacctcggtcgat
gaagaggctcgccataacgatcagtccaccctcgaggcagaaatgctgctcgagaagaag
gacgttcaggatgacaccgaggcggagatcgcagagcgcgctgccaagctcgagtccgat
ctggctgagctagaggccgctggtgccaaggcggatgcccgtcgcaaggtgcagaatgcc
gctgacaaggagatgcagcacatccgcgagcgcggcgagcgcgaggtcgcccgtcttgac
gagatctggaccaccttcctcaagctggccccgaagcagatgatcatcgatgagaccatc
tacgacgagcttgttgatcgctacgaggactacttcaccggcggaatgggcgcggaggct
atccagacgctcatccgtaacttcgacctcgaggctgaggccgaggacctgcgcgaaatc
attcgcaacggcaagggtcagaagaagatgcgcgcccttaagcgcctcaaggttgtcgcc
gcgttcctgcgctccggcaacgatccggctggcatggtcttggacgcgattccggtcatc
ccgccggaactgcgcccgatggtgcagctcgacggtggccgtttcgccacctcggacctc
aacgatctctaccgtcgcgttatcaaccgcaacaaccgcctcaagcgcatgatcgatctc
ggcgcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggagtccgttgacgcc
ctcttcgacaacggtcgtcgcggccgtcctgtcacgggcccgggcaaccgcccgttgaag
tccctgtctgacttgctcaagggcaagcaggggcgcttccgtcagaacctgctgggtaag
cgcgttgactactccggccgttccgtcattatcgtcggtccgcagctcaagctccacgag
tgtggtctgccgaagttgatggctctcgagctcttcaagcccttcgtcatgaagcgcctg
gtggaaaatgactatgcacagaacatcaagtcggcaaagcgcatggttgagcgccagcgc
cccgaggtgtgggacgtcctcgaagaggccatctccgagcacccggtgatgcttaaccgc
gcacctacgctgcaccgccttggtattcaggccttcgagccgaagctggttgagggtaag
gctatccagctgcacccgctggcctgtgaggctttcaacgccgacttcgacggcgaccag
atggcagtccatctgcccctgtccgccgaggcacaggcagaggctcgcgtcttgatgctg
gcttccaacaacatcctttccccggcatctggcaagcctttggctatgccgcgtctggac
atggttaccggtctttactacctgaccatgaacaagaccgccgaggagctcggtggcgag
ggtcgttatacccctgccgacgagaatggtccggaaaagggcgtctactcgtcctatgcc
gaggcactcatggcccgcgatcgcggagtcgtgggcctgcaggctccgatcaaggtgcgc
atcgatcacctccgcccgccggaggatatcgaggcacagttcttcccggatggttggcac
aagggcgagtcctggctcgctgagaccaccctaggccgcatcatgttcaacgagctgctg
ccgtggaactacccttaccttgagggcgtcatggtccgtaagggcggctccaaggacacg
gtcctcttgggcgatgtggtcaatgacttggccatcaagtaccccatgattaccgtggcg
caggtcttggacaagatgaaggatgccggtttctactgggccacccgttctggcgtgact
atcaccatgtctgacgtgttggttcttccgaacaaggaagaaatcctcgagtcctatgag
aaggacgcgcagaccatcgagcgtaagtactgggagcagggcgccctgaccgagcgcgag
cgttatgaccgcctcgtcgagctgtggaagcacgccaccgacaccgtgggtaacgcggtg
gagaagctctacccggacgataacccgattccgatgatcgtgaagtccggcgccgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggtcgtgaactccaagggt
gactacatcacccgcccgattaagacctctttccgtgaaggtctgtcggtgttggagtac
ttcaacaactcgcacggttcccgcaagggcctggccgataccgcgctgcgtaccgccgac
tccggctacctcacccgccgtctggtggatgtggcgcaggacgtcatcgtgcgcgaagag
gattgtggcacccgtcagggtgtgcgcatcccgctgggcaccgaggtggcaccgggcaag
tacgaggttcacgagctgtgggagacctcggcttcgggccgcgtcgtggctaccgatgtc
aaggattcacacggcgagatcgttgctcaggcgggcgaggatctcaccgaggagctgacg
gacaagctggtcaacgctggcgttctcgacatcaaggttcgctccgtgctgacctgccag
acccctgccggcgtctgcgccaagtgctacggcaagtccatggcttctggccagttggtg
gatatcggcgaggccgttggcatcgtcgccgcccagtccattggtgagccgggtacccag
ctgaccatgcgtaccttccaccagggtggtgtcggtggcgatattaccggcggcctgccc
cgtgtgcaggagctcttcgaggctcgtaacccgaagaaccgcgcgcccatcgcttctgtc
gatggcacggtttcgctctccgatgagggtaacttctggaccttgactatcaccccggat
gacggttctgacaacgttgtctacgagaagctctcgaagcgccagggcctggcccaggtg
cgtcgccccatggagtccaacccggatgccatgattgagcgttccctgcgtgacggtgac
cacgtcaccaccggtgagcgcctcatgcgtggcgctgcggatccgcacgacgtgcttgag
gtcttgggacgccgcggcgtcgaaaagcacctcatcgacgaagtgcaggccgtctaccgc
gcacagggtgtggctatccacgacaagcacatcgagatcatcattcgtcagatgctgcgt
cgcggtaccgtcatcgacgcaggttccacggacttcctgcccggcactcttattgacctc
tctgaggccaagcagatcaatgccacgcaggtcgccgagggtggcgagccggcgcagctg
cgctccgagatcatgggtatcaccaaggcctcgctggccacggaatcctggctctcggcc
gcctccttccaggagaccacccgcgtgcttaccgacgccgctattaacaagcgctccgat
aagctcattggcctcaaggagaacgtcatcatcggtaagctcattccggccggtaccgga
atctcgcgttaccgcaacatctccgtcaagccgaccgaggccgcccgcaacgcggcgtac
tcgattccgacttacggcgattccatctacggcgacgacggcttcggtgaattcaccggt
gcctccgtgcctctggatgaggacttcaacttctaa
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integrated database retrieval system
