Corynebacterium flavescens: CFLV_03580
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Entry
CFLV_03580 CDS
T05018
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfc
Corynebacterium flavescens
Pathway
cfc03420
Nucleotide excision repair
cfc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFLV_03580
03430 Mismatch repair
CFLV_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfc03400
]
CFLV_03580
Enzymes [BR:
cfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFLV_03580
DNA repair and recombination proteins [BR:
cfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFLV_03580
MMR (mismatch excision repair)
Other MMR factors
CFLV_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Heme_oxygenase
DEAD
Motif
Other DBs
NCBI-ProteinID:
APT86362
UniProt:
A0A1L7CKH4
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All DBs
Position
760552..763716
Genome browser
AA seq
1054 aa
AA seq
DB search
MTLAGALGKKFPPTAEQAHVIESPLGPKLVVAGAGAGKTETMAARVVYLVANGLVRPEQV
LGLTFTRKAAQQLEKRIRTQLMALRGSGLIVPGSDVAEALSNIAPAVSTYDSYAGDLVRE
YGLLLPVEPSARIITEAERFAIAHEVVRNYGGRLSAGQSLSTVTQTLLRLSESMDSELVD
PAALRAHAEVFQLTAEDLEKTSKKGPEFSKQVQKYLDTQKLRLEYLPLVEALHEEQAARA
VITFGEQMSIAARLARTHPQVGQQQSQRYRVIMLDEYQDTSYAQRILLRSLFGGERQGLA
VTAVGDPMQAIYGWRGATAENLAAFVEDFPQAGGAPAGKDQLTTSWRNPVRVLALANDVA
TSVFAGAPRPVDELEARAGAAPGEVSLGYFATGAQEREFIAQHLHKLWEKRPEESGFSAA
VLVRTNRQSALISQALDEVGVPNEIVGVGGLLWQPEVQDLVALATMLVRPQDSEAALRVL
SGPLCGLGVADIQALHSRQRNLMGAGDARVRWEEGSDALAHLSAQLEQAVAEGPDQVLGL
ADALADLGERERYTPQGLARMEEVGAKLRHLRTYALSKPLSDLFADIEDLFCLRTEVLTR
GGAGATTQLDKFAEVVASFHGDSLYAFLDFVELARERENGLDSGEVPTRGDRVQIMTVHK
AKGLEWEHVCVVHADSSSYGAKAETFLTNVHKVPGDEDVIEVDPDATKRSAFGKACEEYK
AQVREHEAEEAARLFYVALTRSEATLTITGSGTNLKTGASKQGPYAYLALLRAKHPDLVV
HWDVPEDPEALEAAPPQEADFPALHPAPEALAGAEAVLAAMEELPDLSAGETYELWEQEA
GALIEEYSLLQAPVVEVEMPSELTASDMVALSTDPVQFARRQRRPIPFKPNSYAKRGTAF
HAWLEDYFAMPALLGEDELPGAEETEPVDVEKLRQDFLESEWADRVPAFVEAPFEITIGS
SVVRGRMDAVFSQPDGSWFIVDWKTGRPPAGSALRSAEVQLAVYAEAWRRIRRADNVRAA
FYYVREGYLFEPRDLPRGDKLAELLESAVTPPQV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctggcaggggccttgggcaagaagtttccgcccaccgccgagcaagcccacgtc
atcgaaagcccgctgggacccaagctcgtcgtcgccggcgcgggtgcgggcaagacggaa
accatggccgcgcgagtggtctacctggttgctaacgggctcgtgcgcccagaacaggtc
ttgggattgacctttacccgcaaggcggcccagcagctggaaaaacgcattcgcacccaa
ttgatggcgctgcgcggatcgggcctcatcgttccgggttcagacgtggcggaggcattg
agcaatatcgccccggctgtgtccacctatgattcctacgctggggacttggtgcgtgag
tacgggctcttgctaccggtggaaccgagtgcccggatcatcaccgaggccgagcgcttt
gccatcgcccacgaggtagtgcgcaactatggcggcaggctgtctgcgggccagtctttg
tccacggtgacccaaacgctgctgcgtttgagcgagtccatggatagcgaattggtcgat
cccgcagctctgcgcgcgcacgcggaggtgttccagttaaccgccgaggatctggagaaa
acgagcaagaaagggccggagtttagcaagcaagtccagaagtatctcgatacccaaaag
ctgcggctggaatatctcccgctcgttgaggctttgcatgaagagcaggccgcgcgtgct
gtcataacttttggtgagcagatgtccatcgcggcccgcctggcacggacgcacccacag
gtggggcagcagcagagccagcgctaccgagtcatcatgcttgatgagtaccaagacacc
tcctatgcccagcgaatcctgctgcgcagcctttttggcggcgagaggcaggggctggcc
gttaccgcggtgggagatcccatgcaagccatctatggctggcgcggggccacagcggag
aacctggccgccttcgtcgaggactttccgcaggctgggggagcgccagcgggcaaggat
cagctcaccacctcctggcgcaatccggtccgggtgctggcgctggctaacgacgtcgcc
acctcagtattcgccggcgcgccgcggcccgtggacgagctcgaggcccgcgccggtgcc
gcgccgggcgaggtgagcctgggttatttcgccacgggtgcgcaagaacgcgagtttatt
gcccagcacctccataagctctgggaaaagagacctgaggaatccggttttagcgcggca
gtgttggtgcgtacgaaccgtcagtccgcattgatttcgcaggccctcgatgaggttggc
gtgcccaatgagattgtcggggtgggcggcctcctctggcagccggaggtccaagatctc
gtggccctagcaacgatgctggtgcgcccccaagacagcgaggcggcgttgcgagtgctc
agcgggcctttgtgtggcctgggcgtggctgatatccaggcgctgcattcccgccagcgc
aatctcatgggcgcgggggatgcccgcgtgcgctgggaggaaggcagcgatgctttggcc
catttatcggcgcagctagagcaggcggtggcggagggcccggaccaagtcctggggctt
gccgacgccctcgctgacttaggcgagcgcgagcgctacaccccgcaggggctggcgcgc
atggaagaagtaggagctaagctgcggcacctgcgtacctatgccttgtctaagccactc
agcgatcttttcgccgacatcgaggatctcttttgcctgcgcaccgaggtccttacccgc
ggcggcgcaggcgctaccacccagcttgataagtttgcagaggtggtagccagtttccac
ggtgattctctctatgctttcctcgattttgtcgagcttgcccgcgagcgtgaaaatggc
ctggactccggcgaggttcccacccgcggggaccgcgtgcagatcatgaccgtgcacaag
gccaaaggcttggagtgggagcatgtctgcgtcgtccacgcggactccagcagctatggc
gctaaggcagagaccttcctcaccaacgtccataaggtccccggggatgaggatgtcatt
gaggtcgacccggatgccacgaagcgctccgcctttggcaaggcctgcgaggagtataag
gcgcaggtgcgcgagcacgaggcagaggaggccgcgcgcctgttctatgtggcgctcacg
cgctccgaagccactctcaccatcacgggttccggaactaacctcaagacaggggccagc
aagcaggggccctacgcgtatttggcgctcctgcgggcaaagcacccagatctcgttgtc
cactgggatgtgccggaagaccccgaagccctcgaggcagcgccgccacaggaggcagac
ttcccggcgctgcaccctgcaccggaggcgcttgccggggccgaagcagtcttggccgcc
atggaagaacttccggatttaagcgcgggggaaacctacgagctctgggagcaagaagcc
ggtgccttgatcgaggagtattccttgctgcaagccccggttgtcgaggtagagatgcct
agcgagctcacggcctctgacatggtggcgttgagcacggatcccgtccaattcgcgcgc
cgacaacgccgacccattcccttcaagcccaattcctatgccaagcgcggcacggctttc
catgcctggttggaggattacttcgccatgcccgccttgctcggcgaggatgagcttccc
ggcgcagaggagacggagcctgtcgacgtcgagaagctgcgccaggacttcctcgaatcg
gaatgggccgaccgtgtgccggcgttcgtggaggcgcccttcgaaatcactatcggttcc
agcgtggtgcgcggaaggatggatgcggtattctcacagcctgatggctcgtggttcatc
gtggattggaagacggggcgccctcctgcgggctcggccttgcgctcggcggaggtgcaa
ttagcggtctacgccgaggcgtggcggcgcatccgtcgtgcagacaatgttcgtgccgcg
ttctactatgtgcgggagggatacctcttcgaaccccgtgatttgccgcggggcgataag
cttgctgagcttttggaatcggcggtgactccgccacaggtttaa
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