KEGG   Corynebacterium flavescens: CFLV_04015
Entry
CFLV_04015        CDS       T05018                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cfc  Corynebacterium flavescens
Brite
KEGG Orthology (KO) [BR:cfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfc03400]
    CFLV_04015
Enzymes [BR:cfc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CFLV_04015
    5.6.2.6  RNA 3'-5' helicase
     CFLV_04015
DNA repair and recombination proteins [BR:cfc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CFLV_04015
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD Helicase_C WH2_Lhr ResIII PhoH DUF6406 HTH_IclR
Other DBs
NCBI-ProteinID: APT86431
UniProt: A0A1L7CKN4
LinkDB
Position
852556..857409
AA seq 1617 aa
MPENILSRFHPQVAGWFQEVFAAPTSVQAAAWEAISRNEHALVVAPTGSGKTLAAFLWAL
DSLVEREGQTALPVGKAQGTHDGVRILYISPLKALGVDVENNLRAPLAGISRVAERMGLP
IPDISVAVRSGDTPAAERARQVRKPPDVLITTPESAYLMLTSKAAGILSTVDTVIVDEIH
ALAGTKRGVHLALTLERLAAVAGSFQRIGLSATVRPLSAVANFLGGGRPVEIVAPPAQKR
WSLQIHVPVEDMSDLPTPEHGSTIGELTVDDRIGITRENLPPVAEDSALPSAKSIWPFIE
EELYREVMEHRSTLIFVNARRTAERLTSRLNELYAQEFDPDSLSPETRRDPAQLMKQVDV
AGKAPAIIARAHHGSVSKDERAQTETMLKEGTLRAVVATSSLELGIDMGAVELVVQVESP
PSVASGLQRVGRAGHSVGAVSHGSFYPKHRADLVQSALTVTRMQEGLIEEMHSPANPLDV
LAQQTVAQVAAHADGIDVDEWYDTVRRAWPYRDLAREVFDSVIDLVSGVYPSTDFAELKP
RVVYDRVTGLLTPRPGAQRVAVTSGGTIPDRGMFGVFLAGGQGAPRRVGELDEEMVYESR
AGDVFTLGATSWRIEEITRDQVIVTPAPSHTGRLPFWNGDQAGRPFELGQALGAYRRDVR
EDPGLIRDVDKRGRANILAYLNEQYEATGLVPDEKTLLLERFHDELGDWRIVLHSPFGRG
VNAAWALAVGARVAERTGMDPQAVAGDDGIVLRLPEGEEEPDASLFIFDADEIADLVSEQ
VGGSALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAEQLLDVARKYPSFPIILETVR
ECLQDVYDLPALSTTMRELGHRRIRIAEVTTQQPSPFASTLLFNYTGAFMYEGDSPLAEK
RAAALALDPALLAKLLGTVELRELLEPEIIEQVDAQLQRTAPGRRARTTEEVADLFRVLG
PIPIDELPAHTDVPLAAIKGLGSRIMFVRIGGREHVAQSHDAPLLRDGLGVPVPPGVAAQ
QATITDALAQLVARWARTRGPFILRDLAEAFGLSVSAAHTVLGSLDNIVEGRYRQGIEET
EYCASEVLRIIRSRSLAAARAATEPVSQAAYGRFLPDWQQVAPSGQRPALRGADGVFAVV
EQLAGVRLPASAWESLVLPARVGDYSPPLLDELTLNGEVLIVGAGKAGNADPWIMLLPVD
YAAQLIPHHDTHSLSVVQQAVVAVLSRGGGFLFHDLAREVPATPQELREAMWELVEMGIV
SPDSFGPVRSHLAASGRRAATAHRAKRRPTRSRLRMGRTSFAQAQQAGPGAGGAVPNDMA
GRWALSMAASTEATARSVAHGEAWLDRYGVVTRGSVVAEDVIGGFALAYKVLSGFEESGK
ALRGYVIDGLGAAQFSTPAVIDRLRGLADSPDVMGWPSGTQEPQTYVLAAADPANPYGAA
LPWPQRDDSDGQTGKGGPTRAAGALVVLVDGLLIAHLSRGGRSLSTFFDALPGGISHEEA
VRFLLVAVTELIAAGRLSPLVIEKANGRPVHESALASLLREAGAGITPKGVRISAQARAP
RIPRGGRRVSQAIDDLSFDDPQDPASPDEGRDPGRTEGGGGGFRPRGPAPFRGQRRR
NT seq 4854 nt   +upstreamnt  +downstreamnt
atgccggaaaatatcctttcacgtttccatccccaggtagcgggatggttccaggaggtt
ttcgccgccccaacttcagtccaggctgcggcttgggaggccatttcccgcaacgagcat
gccttagttgtggcgccgaccggctccggtaagacgctggcggcctttctctgggccttg
gatagcctcgttgaaagagagggccagactgcgcttccagtgggaaaggcgcagggtacc
cacgatggggtgcgcatcttgtatatttcaccgcttaaagccctcggcgtcgatgtggag
aataacctgcgggcgccactggcgggaatttcccgtgtggctgagcgcatgggactgccc
atcccggatatctcggtggcggtgcgctcgggagataccccagccgcggagcgtgcacgc
caggtacgcaagcccccagacgtgttaattaccactccagaatctgcctatctcatgctc
acgtctaaagccgcgggcattttatctacggtggacacggtcatcgtggatgagattcac
gcactggcgggcacgaagcgcggcgtgcacctggcgctaaccctcgagcggctggcggcg
gtggcaggctccttccaacgcattgggctttcagccacggtgcgtcccctgagtgcggtt
gcaaactttctcggaggtggtcgccccgtagagatagtcgcaccccctgcgcagaagcgc
tggagtctgcagatccacgtgccggtggaggacatgtcagatcttcccaccccggagcat
ggctcaaccatcggtgagctcactgttgatgatcgcattgggatcacccgcgagaatctc
ccgccggtggctgaggattcagcgctgccgagtgcgaagtcgatctggccgttcatcgag
gaggaactctatagagaggtcatggagcaccgttcaacgctcatctttgtcaacgcccgc
cgcaccgccgagcgtttgacctcgcgcctcaacgagctctatgcgcaggagtttgatcca
gatagtctttcccctgagaccaggcgcgatcccgcgcagctgatgaagcaggtggacgtg
gcgggcaaggctcccgcaatcatcgcccgtgcgcatcatggctcggtttctaaggatgag
cgcgcgcagacagagacgatgctcaaggaaggtaccctgcgcgccgtggtggcgaccagc
tcccttgaactgggaatcgacatgggtgccgtcgaattggttgtccaagtagagtcgccg
ccctcggtggcctccggcctgcagcgtgtgggccgcgccgggcactcggtgggggccgtc
tcgcacggttctttttatcccaagcaccgtgcagatctcgtccaatcggctctgaccgtc
acgcgcatgcaagaggggctcatcgaggaaatgcattcgccggccaaccctcttgatgtg
ctggcgcagcaaaccgtggcccaggtcgccgctcatgcggatggtattgacgtcgatgaa
tggtatgacaccgtgcggcgagcctggccctaccgcgatctggcccgggaggtgtttgac
tcggtcatcgatctggttagcggtgtctatccctccaccgactttgcggaactgaagccg
cgggtagtctatgaccgagtcaccgggttgctcaccccacgaccaggtgcgcagcgcgtc
gccgttaccagcggaggaaccatcccggatcgcggcatgttcggggtgtttctagccggt
ggccaaggcgcgccgcgccgagtgggagaactcgacgaggagatggtctacgagtcccgt
gcgggtgacgtatttaccctcggggccacaagctggcgaatagaggagatcacccgcgac
caggtcatagtgaccccggcccccagtcacacaggccggctgcctttttggaacggtgac
caggccggccgccccttcgaactggggcaggcgctgggcgcgtatcgccgcgacgtgcgc
gaggacccgggtcttatccgcgacgtcgacaagcgcgggcgtgcgaatatcttggcctac
ctcaacgaacagtacgaggccacgggtctcgttcccgatgaaaaaaccctgcttctggag
cgttttcacgatgagctaggggattggcgaatagtgctgcactcgccctttggccgcgga
gtcaacgctgcatgggctctcgccgtaggtgcgcgcgtggcagaaagaacgggcatggat
cctcaggccgttgccggcgacgacggcatcgtcctgcgccttccggagggtgaggaggag
ccggatgcgtccctttttatcttcgacgcggatgagatagcagatcttgtctccgagcag
gtgggcggctcagcgctttttgcctctcgctttcgcgagtgcgcggccagggctttgttg
ctgccacggcgcaatccgggcaagcgtgcccctctctggcagcagcggcagcgcgccgag
cagcttctcgacgtcgcccgcaaatatccttcattccccatcatcttggagacagtgcga
gagtgcctgcaggacgtttatgacctcccggctttaagcaccacgatgcgcgagctcggg
catcgccgaattcgcatcgcggaggtgacaacgcagcagccctcgccctttgcttcgacg
ctgctctttaactacacaggcgcctttatgtacgagggggattcgcccctggcggaaaag
cgtgctgctgcgctggctcttgacccggcgctcctggccaagttgctgggaaccgtcgag
ctgcgcgagcttctagaacccgagatcatcgagcaggtggatgcgcaactgcagcgcact
gcgccggggcgaagggcgcgcaccaccgaggaggtggcggatctcttccgcgtcctcggc
cctattcctattgatgagctacccgcgcacacggatgtcccgctcgcggcgatcaagggc
cttggctcgcgcatcatgttcgtgcggatcggcgggcgcgagcacgtggcccagtctcac
gatgcgccattgctgcgtgacggactaggggttccggtcccgccgggcgtggcggcgcag
caggccaccatcaccgatgctttggcacagctggtggcgcgttgggcacgcacgcgtggg
cccttcatattgcgcgatctcgcggaagcctttggtctttctgtctcggccgcgcatacc
gtgcttggatccttggataacatcgtggaggggcgctatcgccagggaatcgaggagacg
gagtactgcgcgagcgaggtcttgcgcatcattcgctcgcgttctcttgcggcggcgcgt
gcagccaccgagcccgtctcgcaggctgcttatgggcgtttcctcccggattggcagcag
gtcgcgcccagtggacagcgcccggcgttgcgtggggctgatggggtatttgccgtcgtc
gagcagctggccggggtgcgcctgccggcctctgcgtgggagtctttggtgttgccggcg
cgggtgggggactactctccaccgctgcttgacgagctcaccctcaacggggaagtgctt
atcgtcggcgcgggtaaggccggcaacgcggatccttggatcatgctcttgccggtggat
tacgcggcccaactcattccacaccacgacacacactccctgagtgtggttcagcaggcg
gtagtggcggttctatcccggggaggcggatttcttttccacgaccttgcccgggaagtg
ccggcgacgccccaggagctgcgggaagcaatgtgggagcttgtggagatgggcatagtt
tccccggattcctttggcccagtgcgttcccatcttgcagcctccggtcggcgcgctgcc
accgcccatcgtgccaagcggcgccccacccgctcgcgcctgcgcatgggcaggacctct
tttgcccaggcgcagcaagcgggaccgggagccggtggcgctgtgcctaacgatatggcg
gggaggtgggcactgtccatggcggcttcgacggaggccaccgcccgctcggtggcgcac
ggggaggcctggctggatcgctatggcgttgtcacccgcggcagcgtggtcgcggaggac
gtcataggaggtttcgccttggcctacaaggtactctccggtttcgaggaaagcggcaaa
gcactgcgcggttacgttattgacgggctgggcgctgcgcagttttccacgcccgccgtc
atcgatcgactgcgtggcctcgcggattcccccgatgtcatgggctggccctcggggacg
caggagccgcagacttatgtcttggccgcggcggatcccgctaatccctacggcgccgcg
ctgccctggccgcagcgcgatgatagtgatggccagacaggtaagggtgggcccacgcgt
gcggctggtgcgctggtagtgcttgtcgacggcctactcatcgcccaccttagccgtggc
ggccgcagcctgagcaccttcttcgatgccctgcctggaggcattagccacgaagaagcg
gtgcgctttctactggtggcagtaactgagcttatcgccgcgggcaggctctcaccccta
gtcattgagaaggctaacgggcgcccagtacacgaaagcgccctggcttcgctcctgcgg
gaagcgggtgccggcatcactcccaaaggcgtgcgcatcagcgcccaagcgcgtgccccg
cgcattccgcgcggtgggcgaagggtcagccaggcgatagatgacctcagctttgacgat
ccgcaggaccccgcgagccctgatgaaggtagagacccaggaaggacagaagggggcgga
ggcggcttccgtccgcgcggcccagcgccgtttcgggggcagcggcgtcgatag

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