Corynebacterium flavescens: CFLV_05785
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Entry
CFLV_05785 CDS
T05018
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cfc
Corynebacterium flavescens
Pathway
cfc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFLV_05785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfc03400
]
CFLV_05785
DNA repair and recombination proteins [BR:
cfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFLV_05785
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFLV_05785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
APS_kinase
AAA_33
nSTAND1
AAA_22
nSTAND_NTPase5
AAA_21
nSTAND3
DnaJ_CXXCXGXG
AAA_18
NACHT
SLFN-g3_helicase
CCDC24
Viral_helicase1
Mtrc-MtrF_II-IV_dom
MeaB
cobW
Septin
NTPase_1
DUF2752
IIGP
Motif
Other DBs
NCBI-ProteinID:
APT86745
UniProt:
A0A1L7CLR8
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All DBs
Position
1235220..1238057
Genome browser
AA seq
945 aa
AA seq
DB search
MADRLVVRGAREHNLKGVDVDLPRDKMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVEFIDGLSPAVSIDQKSTNHNPRSTVGTITEIYDYLRLLFSRAGTPH
CPVCDAVIERQTPQQIVDTVLSQAEKLKFQVLAPVVRKRKGEFVDLFSDLSAQGYSRVRV
DGEMYQLAEPPKLKKQVKHNIDVIVDRLQVKASQKQRLTDSVETALRLADGLVTIDFVDN
PELTHTYSEKAACPNGHALAIEEYEPRAFSFNSPFGSCPACDGLGTRLEVDVELLIPDPD
APAVDAIQPWHSSPNSRYFVKLVEGLASTLGFDAHAPVSELNEEQRHALIYGTDTEVQVR
YKNRYGRQRNWTAPFEGAVGFLERKIETADSDSQKDRLLQYMRRVPCPTCGGTRLKPEIL
AVRLASSSHGEQSIAGLCALSIDEAAAFLQTLQLGHREEIIAGAVLKEVQARLRFLLDVG
LSYLTLNRGASTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQRLITTLQKL
RDIGNTLIVVEHDEETIRQADWLVDVGPRAGEYGGEIVYQGPPKGVEDVPESLTGQYLSG
RKSLGVPDKRRKIDKARVLKVVGARENNLHNIDVEIPLGVLVCVTGVSGSGKSTVVNQIL
AKTLANKLNRARQVPGRAKRVEGIEHLDKLVQVDQSPIGRTPRSNPATYTGVFDKIRNLF
AETQEAKVRGYKPGRFSFNVKGGRCEACHGDGTIKIEMNFLPDVYVPCEVCHGARYNRET
LEVLYKGKNIAEVLEMPISEAADFFEPITSIHRYLATLVEVGLGYVRLGQAATTLSGGEA
QRVKLAAELQKRTNGRTVYILDEPTTGLHFEDIRKLMLVIQGLVDKGNSVIVIEHNLDVI
KAADWIVDMGPEGGSGGGTVVAKGTPEDVAAVAGSYTGQFLKELL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaccgtctggtcgtacgcggagcgcgtgagcacaacctcaagggcgtggacgta
gacctaccccgcgataaaatggtcgtgtttacagggctatcgggttcagggaaatcatcg
ctggcctttgacacgatcttcgccgagggacagcgccgctatgtggagtccttgagctcc
tatgcccgcatgttcttggggcagatggacaagcccgacgtcgagttcatcgacggactc
tccccagcggtgtccatcgaccaaaagtccaccaaccacaatcctcgttccaccgtcgga
accatcacggagatctatgactatctccgcttgttgttctcgcgtgcaggaacaccccat
tgcccggtgtgtgatgcggttatcgagcgccagaccccgcaacagattgtggacacggtc
ttgagccaggctgagaagctcaagttccaggttctcgccccggtggtgcgcaagcgcaag
ggtgagttcgtggacctcttttccgacctatccgcgcagggctattcccgcgtgcgggtg
gacggtgagatgtatcaactcgcggagccgccgaagctcaagaagcaggttaagcacaac
atcgatgtgatcgtcgaccgcctgcaggtaaaagcctcacagaagcagcgcctgacggat
tcagttgagaccgcgctgcgcctggcagatgggctagtgaccattgacttcgtggataat
ccggagctgactcatacttactcggagaaggcggcctgccccaatgggcacgctctggcg
attgaggagtacgagccccgcgccttctccttcaactcgcccttcggctcctgcccggcc
tgtgacgggctgggcacgcgcctcgaggtagacgtagagctattgatcccggatccggat
gcgccggccgtggatgccatccagccctggcactcgagcccgaactcgcgttactttgtc
aagctcgtcgagggcctggcatcaacgttgggcttcgatgcgcatgcgcctgtcagcgag
ctcaatgaggaacagcgccatgccctcatttatggaacggatactgaagtacaggttcgt
tataagaatcgctacggcaggcagcgcaactggactgctcctttcgagggagcagtgggc
tttttggagcgcaagattgagaccgcagactcagattcgcagaaagaccgcctgctgcaa
tacatgcggcgcgtgccctgcccaacctgcgggggaacgcggctcaagccggagattcta
gcggtccgcctcgcgtcttcctcgcatggggagcaatccatcgccggcctgtgtgccctt
tccatcgatgaagccgcggcgttcctgcagaccctgcagctaggccaccgcgaggagatc
atcgctggcgcggtgctcaaggaggtgcaggcccgcctgcgtttcttgcttgatgtgggg
ctgagctatctcacgttgaaccgtggtgcctccacgctgtccggcggcgaggcccagcgc
atccgcctcgctacccagattggttccgggctggctggggtgctctacgtattggacgag
ccctccatcggcctacaccagcgcgataaccagcgccttatcactacgctgcagaagctg
cgtgatattggcaataccctcattgtggtcgagcatgatgaggaaactatccgccaggcc
gattggctggtggatgttggcccgcgcgcgggggagtacggcggggaaattgtctaccaa
ggtcctcccaagggcgtggaagatgtccctgaatccctgactgggcagtatctatcgggg
cgcaagtccctcggcgttccggacaagcggcgcaagattgacaaggcgcgcgtcctcaaa
gtcgtaggcgcgcgtgagaacaacctgcacaatattgacgtggagattccgctgggtgtc
ctcgtgtgtgtcacaggcgtctctggttccggtaagtccaccgtggtcaatcagatcttg
gctaagactttggctaacaagctcaatcgggcgcgtcaggttccgggcagagctaagcgg
gtcgaaggaatcgagcacctggacaagcttgtccaggtggatcagagtcccatcggccgc
actccgcgttccaacccggccacttatacaggtgtgtttgacaagatccgtaacctcttc
gccgagactcaggaggcgaaggtccgcggctacaagcccggaaggttctccttcaacgtc
aagggcggtcgttgcgaggcctgtcacggagatggaacgatcaagattgagatgaacttc
cttcctgacgtctacgtcccctgcgaggtctgccacggtgcacgctataaccgggagacc
ctggaggtcttgtacaaggggaagaacatcgccgaggttctagagatgcccatctccgag
gcggccgatttcttcgagcccatcacctccatccaccgctacctggccacgctggtcgag
gtgggcctgggatatgtccgtctagggcaggccgcaaccacgctgtccggcggtgaggcg
caacgcgtaaaactcgcggcggagctacaaaaacgcaccaatgggcgtacggtctacatc
ctggatgagccgaccaccggcctgcactttgaggacatccgcaagctgatgctcgtcatc
cagggcctagtggacaagggcaactccgtcatcgtgatcgagcacaacctcgacgtcatc
aaggctgcggactggatagtagatatggggcctgagggtggttctggcggcggaacggtc
gtggccaagggcactcccgaggatgtcgcagccgttgccggttcttatactggccagttc
ctcaaagaactgctctag
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integrated database retrieval system