Corynebacterium flavescens: CFLV_07935
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Entry
CFLV_07935 CDS
T05018
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cfc
Corynebacterium flavescens
Pathway
cfc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFLV_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfc03400
]
CFLV_07935
Enzymes [BR:
cfc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFLV_07935
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFLV_07935
DNA repair and recombination proteins [BR:
cfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFLV_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
DZR
NFACT_N
Zn_Tnp_IS91
HscB_4_cys
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
APT87128
UniProt:
A0A1L7CMT1
LinkDB
All DBs
Position
complement(1711364..1712212)
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AA seq
282 aa
AA seq
DB search
MPELPEVETVRRGLEPYLKGRSFAQMEVLHPRANRGQEAPLKQLLERRTIRGVARRGKFL
WLEFADENLKDPSRDVMFIHLGMSGQLRIGPSDSKHVRIRTRLSDGTELSFIDQRTFGYW
LFAPWLKIAHIAPDPLEADFDAAAAARKIRAKRTVIKTALLDQTVVSGIGNIYADEALWR
AKIHPQTKACDLSQANALALVDAATTVMRGALAVGGTSFDALYVNVNGESGYFSRSLHAY
GRTGKSCDRCGSPIRRIVVGGRSSHFCPRCQRRTSARSRVRE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaccggaggtcgagaccgttcgccgcgggctcgagccttacttgaagggg
cgtagcttcgcgcagatggaggtactgcatccgcgtgcgaaccgcgggcaggaggcaccg
ctcaagcagctccttgagcgaagaacaatccgtggcgtggcgcggcgaggaaaattcctg
tggcttgagtttgcggacgagaaccttaaggacccttcgcgtgatgtcatgttcattcat
ctgggcatgtcggggcagctgcgcatcggccctagcgattccaaacacgtgcgcatccgt
acgcgcttgagcgacggcaccgagctgagctttatcgatcaacgcacctttggctactgg
cttttcgcgccctggctgaagattgcacacatcgccccagatcctctggaggcagacttt
gatgctgcggccgccgcgcgcaagatccgtgccaaacgcacagtgattaagacggcgctg
ttggaccagacggtggtctctggcatcggcaacatctatgccgatgaggcattatggcgc
gcaaagattcacccccaaaccaaggcctgtgatctctcgcaggccaacgccctagcgctt
gtcgatgccgccaccaccgtcatgcgcggggccctcgccgtcggcggcaccagcttcgat
gcgctttatgtcaatgtcaacggcgagtcggggtacttttcccgctcgctgcatgcctat
ggccgcacggggaagtcctgtgatcgctgcggcagcccaattcgccgcatcgttgtcggc
ggccgttcttcgcacttttgcccccgctgtcagcgcagaacctcagcgaggtcacgggtg
cgggagtag
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