KEGG   PATHWAY: cfd01100
Entry
cfd01100          Global    Pathway                                
Name
Metabolic pathways - Citrobacter freundii CFNIH1
Class
Pathway map
cfd01100  Metabolic pathways
cfd01100

Module
cfd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cfd01100]
cfd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cfd01100]
cfd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cfd01100]
cfd_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cfd01100]
cfd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cfd01100]
cfd_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cfd01100]
cfd_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cfd01100]
cfd_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cfd01100]
cfd_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cfd01100]
cfd_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cfd01100]
cfd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cfd01100]
cfd_M00012  Glyoxylate cycle [PATH:cfd01100]
cfd_M00015  Proline biosynthesis, glutamate => proline [PATH:cfd01100]
cfd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cfd01100]
cfd_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cfd01100]
cfd_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cfd01100]
cfd_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cfd01100]
cfd_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cfd01100]
cfd_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cfd01100]
cfd_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cfd01100]
cfd_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cfd01100]
cfd_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cfd01100]
cfd_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cfd01100]
cfd_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cfd01100]
cfd_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cfd01100]
cfd_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:cfd01100]
cfd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cfd01100]
cfd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cfd01100]
cfd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cfd01100]
cfd_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cfd01100]
cfd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cfd01100]
cfd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cfd01100]
cfd_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:cfd01100]
cfd_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cfd01100]
cfd_M00063  CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO [PATH:cfd01100]
cfd_M00064  ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep [PATH:cfd01100]
cfd_M00082  Fatty acid biosynthesis, initiation [PATH:cfd01100]
cfd_M00083  Fatty acid biosynthesis, elongation [PATH:cfd01100]
cfd_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cfd01100]
cfd_M00087  beta-Oxidation [PATH:cfd01100]
cfd_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cfd01100]
cfd_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cfd01100]
cfd_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cfd01100]
cfd_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:cfd01100]
cfd_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cfd01100]
cfd_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:cfd01100]
cfd_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cfd01100]
cfd_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cfd01100]
cfd_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cfd01100]
cfd_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cfd01100]
cfd_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cfd01100]
cfd_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cfd01100]
cfd_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:cfd01100]
cfd_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:cfd01100]
cfd_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:cfd01100]
cfd_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:cfd01100]
cfd_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:cfd01100]
cfd_M00149  Succinate dehydrogenase, prokaryotes [PATH:cfd01100]
cfd_M00150  Fumarate reductase, prokaryotes [PATH:cfd01100]
cfd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cfd01100]
cfd_M00168  CAM (Crassulacean acid metabolism), dark [PATH:cfd01100]
cfd_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:cfd01100]
cfd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cfd01100]
cfd_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:cfd01100]
cfd_M00417  Cytochrome o ubiquinol oxidase [PATH:cfd01100]
cfd_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cfd01100]
cfd_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:cfd01100]
cfd_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:cfd01100]
cfd_M00549  UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:cfd01100]
cfd_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:cfd01100]
cfd_M00554  UDP-Gal biosynthesis, Gal => UDP-Gal [PATH:cfd01100]
cfd_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cfd01100]
cfd_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cfd01100]
cfd_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cfd01100]
cfd_M00621  Glycine cleavage system [PATH:cfd01100]
cfd_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cfd01100]
cfd_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cfd01100]
cfd_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cfd01100]
cfd_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cfd01100]
cfd_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cfd01100]
cfd_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cfd01100]
cfd_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:cfd01100]
cfd_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:cfd01100]
cfd_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cfd01100]
cfd_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cfd01100]
cfd_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:cfd01100]
cfd_M00909  UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:cfd01100]
cfd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cfd01100]
cfd_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:cfd01100]
cfd_M00970  Proline degradation, proline => glutamate [PATH:cfd01100]
cfd_M00982  Methylcitrate cycle [PATH:cfd01100]
cfd_M00988  PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:cfd01100]
cfd_M00989  Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cfd01100]
Organism
Citrobacter freundii CFNIH1 [GN:cfd]
Related
pathway
cfd00010  Glycolysis / Gluconeogenesis
cfd00020  Citrate cycle (TCA cycle)
cfd00030  Pentose phosphate pathway
cfd00040  Pentose and glucuronate interconversions
cfd00051  Fructose and mannose metabolism
cfd00052  Galactose metabolism
cfd00053  Ascorbate and aldarate metabolism
cfd00061  Fatty acid biosynthesis
cfd00071  Fatty acid degradation
cfd00074  Mycolic acid biosynthesis
cfd00130  Ubiquinone and other terpenoid-quinone biosynthesis
cfd00190  Oxidative phosphorylation
cfd00220  Arginine biosynthesis
cfd00230  Purine metabolism
cfd00240  Pyrimidine metabolism
cfd00250  Alanine, aspartate and glutamate metabolism
cfd00260  Glycine, serine and threonine metabolism
cfd00261  Monobactam biosynthesis
cfd00270  Cysteine and methionine metabolism
cfd00280  Valine, leucine and isoleucine degradation
cfd00290  Valine, leucine and isoleucine biosynthesis
cfd00300  Lysine biosynthesis
cfd00310  Lysine degradation
cfd00330  Arginine and proline metabolism
cfd00332  Carbapenem biosynthesis
cfd00340  Histidine metabolism
cfd00350  Tyrosine metabolism
cfd00360  Phenylalanine metabolism
cfd00361  Chlorocyclohexane and chlorobenzene degradation
cfd00362  Benzoate degradation
cfd00364  Fluorobenzoate degradation
cfd00380  Tryptophan metabolism
cfd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cfd00401  Novobiocin biosynthesis
cfd00410  beta-Alanine metabolism
cfd00430  Taurine and hypotaurine metabolism
cfd00440  Phosphonate and phosphinate metabolism
cfd00450  Selenocompound metabolism
cfd00460  Cyanoamino acid metabolism
cfd00470  D-Amino acid metabolism
cfd00480  Glutathione metabolism
cfd00500  Starch and sucrose metabolism
cfd00511  Other glycan degradation
cfd00520  Amino sugar and nucleotide sugar metabolism
cfd00521  Streptomycin biosynthesis
cfd00523  Polyketide sugar unit biosynthesis
cfd00525  Acarbose and validamycin biosynthesis
cfd00540  Lipopolysaccharide biosynthesis
cfd00541  Biosynthesis of various nucleotide sugars
cfd00542  O-Antigen repeat unit biosynthesis
cfd00543  Exopolysaccharide biosynthesis
cfd00550  Peptidoglycan biosynthesis
cfd00552  Teichoic acid biosynthesis
cfd00561  Glycerolipid metabolism
cfd00562  Inositol phosphate metabolism
cfd00564  Glycerophospholipid metabolism
cfd00565  Ether lipid metabolism
cfd00592  alpha-Linolenic acid metabolism
cfd00620  Pyruvate metabolism
cfd00621  Dioxin degradation
cfd00622  Xylene degradation
cfd00623  Toluene degradation
cfd00625  Chloroalkane and chloroalkene degradation
cfd00626  Naphthalene degradation
cfd00627  Aminobenzoate degradation
cfd00630  Glyoxylate and dicarboxylate metabolism
cfd00633  Nitrotoluene degradation
cfd00640  Propanoate metabolism
cfd00650  Butanoate metabolism
cfd00660  C5-Branched dibasic acid metabolism
cfd00670  One carbon pool by folate
cfd00680  Methane metabolism
cfd00710  Carbon fixation by Calvin cycle
cfd00720  Other carbon fixation pathways
cfd00730  Thiamine metabolism
cfd00740  Riboflavin metabolism
cfd00750  Vitamin B6 metabolism
cfd00760  Nicotinate and nicotinamide metabolism
cfd00770  Pantothenate and CoA biosynthesis
cfd00780  Biotin metabolism
cfd00785  Lipoic acid metabolism
cfd00790  Folate biosynthesis
cfd00860  Porphyrin metabolism
cfd00900  Terpenoid backbone biosynthesis
cfd00907  Pinene, camphor and geraniol degradation
cfd00910  Nitrogen metabolism
cfd00920  Sulfur metabolism
cfd00930  Caprolactam degradation
cfd00946  Degradation of flavonoids
cfd00984  Steroid degradation
cfd00999  Biosynthesis of various plant secondary metabolites
cfd01040  Biosynthesis of unsaturated fatty acids
cfd01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   

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