Citrobacter freundii CFNIH1: CFNIH1_00540
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Entry
CFNIH1_00540 CDS
T03077
Symbol
srlR
Name
(GenBank) transcriptional regulator
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfd03000
]
CFNIH1_00540 (srlR)
Transcription factors [BR:
cfd03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CFNIH1_00540 (srlR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
Put_DNA-bind_N
HTH_5
HTH_Mga
FeoC
HTH_AsnC-type
GntR
MarR_2
HTH_20
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AHY10060
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All DBs
Position
106639..107412
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AA seq
257 aa
AA seq
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MKPRQRQAAILEHLQKQGKCSVEELAHYFDTTGTTIRKDLVILENAGTVIRTYGGVVLNK
DESDPPIDHKTLINTHKKEQIAEAAVRYIHDGDSIILDAGSTVLQMVPMLTRFSNITVMT
NSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDLNA
GVTTFNEVFSVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQ
ALEAKGIEVIITGETNE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcgtcagcgtcaggctgccatactggagcacctgcaaaagcagggaaaatgc
tcggttgaagaactggcccactactttgacacgaccggcacaaccattcgcaaagacctg
gtcattctggaaaatgctggaaccgtcattcgtacctatggcggcgtagtgttgaacaaa
gatgaatctgacccgcccatcgatcacaaaaccctaattaacacgcataaaaaagagcag
atcgctgaagccgccgtccgttatatccatgatggcgactccatcattctggatgcgggc
agtaccgtattgcagatggtgccgatgcttacccgctttagcaacatcaccgtcatgacc
aacagtctgcacattgttaatgccctttcggagctggacaacgagcaaaccatcctgatg
cctggcgggacctttcgcaaaaaatctgcgtcatttcacggtcaactggcagaaaacgcc
tttgagcaattcagctttgataaactcttcatgggtaccgacggtattgacctcaatgcc
ggcgtgaccacctttaatgaggtctttagcgtcagtaaagcgatgtgcaatgccgctcgc
gaagtgattctgatggctgactcctcaaaatttgggcgtaaaagccctaatgttgtgtgc
agtctggaaagcgttgacaagctgattaccgatgcgggtattgaccctgcatttcgtcag
gcgctggaagcaaaagggattgaagtaatcataaccggagaaaccaatgagtga
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