Citrobacter freundii CFNIH1: CFNIH1_00855
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Entry
CFNIH1_00855 CDS
T03077
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfd03009
]
CFNIH1_00855 (rumA)
Enzymes [BR:
cfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CFNIH1_00855 (rumA)
Ribosome biogenesis [BR:
cfd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CFNIH1_00855 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
Methyltransf_11
MTS
TRM5-TYW2_MTfase
UPF0020
Cons_hypoth95
Methyltransf_4
Methyltransf_23
Methyltransf_15
Methyltransf_12
FtsJ
Methyltr_RsmB-F
PrmA
Ubie_methyltran
TPMT
Motif
Other DBs
NCBI-ProteinID:
AHY10120
LinkDB
All DBs
Position
complement(172118..173416)
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AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHNGKALFIPELLPQESAEVVITEDKKQ
FARAQVKRRLNDSPQREVPRCPHFGVCGGCQQQHASIPLQQRSKSAALARLMKCEVSDVI
ADTPWGYRRRARLSLNYRSKEQKLQMGFRKSGSSDIIDVKQCPILVPQLEALLPHIRACL
ESLQGLRHLGHVELVQAGSGALMILRHTAPLSAADKEKLECFSHSQGLSLFLAPQSEILE
SVSEESPWYDSNGLRLSFSPRDFIQVNAGVNQKMVACALEWLDVRPEDRVLDLFCGMGNF
TLPLAVRAASVVGVEGVPALVEKARENALNNGLHNVTFFHENLEEDVTQQPWAKNGFDKV
LLDPARAGAAGVMQHIIKLSPGRVVYVSCNPATLARDSDALLNAGYAIRRLAMLDMFPHT
GHLESMVLFERL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacgacgcgtgacgacgcgtcagatcataaccgttacc
gtcaatgacctcgatccttttggtcagggtgtcgctcgccataacggaaaggcgttgttt
ataccagaattgctaccccaggaaagcgcagaggtggtgattaccgaagataaaaaacag
ttcgcccgcgcgcaagtaaaacgacgtttaaacgacagtccacaacgtgaagtgccacgt
tgcccgcattttggcgtctgtggcggttgccagcagcagcacgccagcatcccgttgcag
cagcgtagcaaaagcgcggcgttagcgcgtttaatgaaatgtgaagtgtcggatgttatc
gctgataccccgtggggctatcgtcgtcgcgcacgtttgagcctgaactatcggtcaaaa
gaacaaaaattgcagatgggttttcgcaaatccggttccagcgacattattgatgttaaa
caatgccctattctggtgccccaacttgaagcgctgttgccccacatcagggcgtgtctg
gagagtttgcaagggttacgtcatctcggtcatgttgagctggtgcaggcagggagcggc
gcgttgatgattttacgccacacggcaccattaagtgctgcggataaagaaaaactggaa
tgcttttcgcattctcaggggctgtctttgtttctggccccgcaaagcgagatactggaa
tcagtatcagaagaatcgccctggtatgactcaaatggactacggttaagcttcagcccg
cgtgattttattcaggtcaatgcaggggtaaaccaaaaaatggtcgcctgtgcgctggaa
tggctggatgtgcgacctgaagatcgcgtgctcgatctgttctgcggtatggggaatttt
actctgccgctggctgtgcgggcagcaagcgtggtgggggttgaaggagtaccggcgctg
gtcgaaaaagcccgggaaaacgcgctgaataacggattacacaacgtgacattctttcat
gaaaaccttgaggaggatgttacccagcagccgtgggcgaaaaacggattcgataaagta
ttgctcgatcctgcgcgtgcgggggctgccggtgtgatgcaacatattataaaattaagc
cctggtcgcgttgtttatgtatcctgtaacccagcaacgctggctcgtgacagcgacgct
ttgctcaacgcgggatatgccatacggcgactggcaatgctcgatatgttcccgcacact
ggacacctggaatcgatggtcctgtttgagcgtttgtaa
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