Citrobacter freundii CFNIH1: CFNIH1_01070
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Entry
CFNIH1_01070 CDS
T03077
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cfd
Citrobacter freundii CFNIH1
Pathway
cfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFNIH1_01070 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfd03400
]
CFNIH1_01070 (recC)
Enzymes [BR:
cfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CFNIH1_01070 (recC)
DNA repair and recombination proteins [BR:
cfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFNIH1_01070 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
NLE
Motif
Other DBs
NCBI-ProteinID:
AHY10159
LinkDB
All DBs
Position
complement(223437..226808)
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AA seq
1123 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFGIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDNDDFALLRNYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPDWLTQWEAGRQIEGLGEAQAWQAPLWKALVEYTAELG
QPRWHRANLYQRFIHTLENASECPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAWLAKLLARQRRHSFEERHLPLFRDTQNAAGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQSDILELQSRAVAGVTLDEYSR
SDNKRLLDVNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPADRYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNIDEDGLRYLRLWVNESGIRWGIDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNLWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDESLTCDQSEARVKAHI
TRLHTRMPFDAQNYQPGEQQSYAREWLPAASMSGKAHTDFVQPLPFEMPATLTLETLQRF
WAHPVRAFFQMRLQVNFRSEESEIPETEPFVLEGLTRYQLNQQLLNTLVEENDAERLFRR
FRAAGVLPYGSFGEILWDTQRQEMQSLAERIIACRQPCQSMEIDLICNGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGTGESRLFLRKDGEWRFPPLAAEQALLYL
SQLIEGYREGMSSPLLVLPESGGAWIKTCYDAANDAMLEDDDTLQKARSKFLQAYEGNMM
VRGEGDDIWYQRLWRQLDAETLERIILQSQRYLLPIFRFNQSR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttaatggagtttatc
gttgagcgcgagcggttggacgatccctttgagccggaaatgatcctggtgcaaagcacc
ggtatggcgcagtggctacagatgacccttgcacagaaatttggtattgccgccaacatc
gatttcccgctacccgcgagttttatctgggatatgtttgtgcgcgtgctgccggatatc
ccgaaagagagcgcgtttagcaaacagagcatgagctggaagttaatgaccctgctgccg
caattgctggataacgatgacttcgcactgctgcgaaattatctgacggacgacaccgat
aaacgtaagctgtttcagctttcctctcgcgcggcggaccttttcgatcagtatttagtt
tatcgccctgactggttaacgcagtgggaagcggggcgccagattgaaggactcggcgag
gctcaggcatggcaggcgccgttgtggaaagcgctggtggaatacaccgcagaactgggt
caaccgcgctggcatcgcgccaatttatatcagcgatttattcacaccctggaaaatgcg
tctgaatgtccgcaggggctgccttctcgcgtctttatttgcggaatttcggcgctaccg
ccggtttacctgcaggccttgcaggcgttgggtaagcacattgatattcatctgctgttt
accaacccttgtcgctactattggggcgacattaaagatcccgcctggctggcaaagttg
ctggcgcgtcagcgtcggcacagttttgaagaacgtcacctgccgctgtttcgtgatact
cagaatgcggcaggattgtttaacagtgatggtgagcaggatgtaggcaacccgatgctg
gcctcgtggggtaagttgggacgtgattatatttatctgctttcagaactggaaaacagc
caggagctggatgcgtttgtcgatataaccccagacaatcttttgcataacattcagtcg
gatatcctcgagttacaaagccgggccgtggcgggcgttacgctggacgagtattcccgg
agcgacaacaaacgactgcttgatgtgaacgacaccagcgtgactttccatgtctgccat
agccctcagcgtgaagtggaaattcttcatgaccgactgctggcaatgctggaagcagat
cccacgctgacgccgcgcgacattatcgtgatggtggcggatatcgacagctatagcccg
ttcattcaggcggtttttggcagcgcgccagccgaccgttacttaccctatgcgatttcc
gaccgtcgggcgcgtcagtctcatcccgtcttgcaggcctttatcagtcttctgtcgctg
ccggatagccgttttgtctctgaggatgtgctggcattactggatgtccccgtgctggcg
gcacgtttcaatattgatgaagatggtctgcgctatcttcgtttgtgggttaatgaatca
ggtattcgctggggaattgacgacgataacgtgcgtgaactggaacttccgccaacgggt
caacatacctggcaatttggtttaacgcgcatgctgctcggctatgcgatggaaagcgcc
cagggcgagtggcaatcggtattgccctacgatgagtcgagcggtttgattgccgaactg
gtagggcatctggcctcgttactgatgcagcttaatctctggcgtcgaggactggcgcag
gagcgcccgctggaagagtggctgcctgtttgtcgggacatgcttaatgatttcttcctg
ccggatgcggataccgaagcggcgatgacgctgattgaacagcagtggcaggccattatt
actgaaggactgggggctgagtatggcgatgccgtaccgctttccttgctacgtgatgag
ctggcgcagcgtctcgaccaggaacgcattagccagcgcttcctggcggggcccgttaac
atttgtacgctgatgccgatgcgctctattccttttaaggttgtatgcctgctgggcatg
aacgatggcgtttatccgcgtcagcttgcgccgctgggctttgatctgatgagtcaaaaa
ccgatgcggggcgatcgcagccgtcgcgatgatgaccgttatctgttcctcgaagcatta
atttcggcgcagcaaacgctctacatcagctacattggccgctcaattcaggataacagc
gaacgcttcccgtcggtattggtgcaggaactgatggattacatcgggcaaagccactat
ttgccgggcgacgaatcgttgacctgcgatcaaagcgaggcccgggtaaaagcgcacatt
acacgtctgcatacccgcatgccttttgacgcacaaaactatcagcccggcgaacagcaa
agctacgcccgggagtggctgcctgcggcgagcatgtcaggaaaagcgcatacggatttt
gtgcagcctctcccctttgaaatgccagccacgttaacgctggaaacgttacagcgattt
tgggctcatccggtacgggccttttttcagatgcgtttgcaggtcaactttcgttctgaa
gaaagtgagatcccggaaactgaaccttttgttctggaaggattaactcgctatcagctt
aatcagcaattgcttaacacgctggttgaagagaacgatgctgaacgactgtttcgccgt
tttcgtgcggcaggcgtgctgccctatgggtcatttggcgaaattctgtgggatacgcag
cgtcaggagatgcagtcgctggctgaacgcattatcgcctgtcgtcagccttgccagagc
atggagattgatctcatctgtaacggtgtgcaaatcaccggttggttgccgcaggtgcaa
gaggacggtttgttgcgctggcgcccatctttgataagcattgcccagggggtgcaactt
tggctggaacatcttgtctattgtgccagtggcggtacgggagagagtcggttgttcctg
cgcaaagacggggaatggcgtttcccgccactggcggcagaacaggcgctgctgtatttg
tcgcagctcattgagggatatcgggaaggcatgtcgtcgccattgctggtattaccggaa
agcggcggcgcatggataaaaacctgttatgacgctgcaaatgatgccatgttagaggac
gacgatacgctgcaaaaagcgcgcagtaagtttttgcaggcttatgaaggcaacatgatg
gttcgtggcgaaggcgatgatatctggtatcaacgcctgtggcgtcaactggatgccgag
acgctggaacgcattattttacagtcacagcgctatctgttaccgatttttcgctttaac
cagtcccgatga
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