Citrobacter freundii CFNIH1: CFNIH1_03020
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Entry
CFNIH1_03020 CDS
T03077
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfd03016
]
CFNIH1_03020 (truB)
Enzymes [BR:
cfd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CFNIH1_03020 (truB)
Transfer RNA biogenesis [BR:
cfd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFNIH1_03020 (truB)
Prokaryotic type
CFNIH1_03020 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHY10526
LinkDB
All DBs
Position
complement(621351..622295)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVVARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEDNELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLRELVEQAEQQNIPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGVPLEGLVRVTEGDDGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgcgacattcacggtgtcctgctgctggataagccg
cagggcatgtccagcaatgacgtactgcaaaaagtaaagcgcatctacaatgccaaccgt
gcgggtcataccggcgcgctggatccgctggcgacgggcatgctgcctatctgcctcggc
gaagcgacgaagttttcacagtatttgctggattctgacaaacgctatcgcgtagtagcc
cgcctggggcaacgtactgacacctccgatgctgacgggcaaatcgtgcaggaacgtccg
gtaaccttcagcgcagagcaacttgcgagcgcactggagactttccgcggcgatatcgag
cagattccgtcaatgtattcggcgctgaagtatcagggtaaaaagctgtacgaatatgcg
cgtcagggcattgaagtgccgcgtgaagcgcgcccgattaccgtctatgagctgctgttt
attcgccatgaagataacgagctggagctggaggttcactgctccaaaggcacctatatt
cgcactattatcgacgatctgggcgagaagctcggctgtggtgcgcacgtaacgtacctg
cgtcgtctgacggtcagcaagtatccggtggatcgtatggtgacgctggaacacttgcgc
gagctggttgaacaggctgagcagcagaacattccggccgctcagttgcttgatcccttg
ctgatgccaatggacagtccagcatcggactatcctgttgttaatttgcctttaacatcg
tcggtttactttaaaaatggtaacccggtacgtacgacaggtgtcccgctggaaggcctg
gtgcgtgtgacggaaggcgatgacggcaaatttatcggcatgggggagatcgacgatgaa
ggtcgtgtcgccccccgtcgcctggtggttgagtatcctgcatag
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