Citrobacter freundii CFNIH1: CFNIH1_03800
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Entry
CFNIH1_03800 CDS
T03077
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cfd
Citrobacter freundii CFNIH1
Pathway
cfd00300
Lysine biosynthesis
cfd00470
D-Amino acid metabolism
cfd01100
Metabolic pathways
cfd01110
Biosynthesis of secondary metabolites
cfd01120
Microbial metabolism in diverse environments
cfd01230
Biosynthesis of amino acids
Module
cfd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFNIH1_03800 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFNIH1_03800 (dapF)
Enzymes [BR:
cfd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CFNIH1_03800 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AHY10672
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Position
complement(786690..787514)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDELVRVNMGE
PNFEPSQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTATVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAAHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttctcaccagagctgatccgccgcctgtccgacaggcatctcggcgtt
gggtttgatcagttgctggtggttgaacctccgtatgatccggagctggatttccactac
cgtatttttaatgccgacggcagtgaagtgtcacagtgtggcaatggcgcccgttgtttt
gctcgctttgttcgcctgaaagggctgaccaataaacgtgatattcgcgtcagtaccgcg
aatggtcgtatggtgttaaccgtaaccgacgacgaactggtgcgggtgaatatgggggaa
cccaactttgaaccttcgcaggttccgtttcgcgccaacaaagcagagaagacctatatt
atgcgcgcggccgaacagacaatattgtgcggcgtggtttcaatggggaacccacactgc
gtgattcaggttgatgatgttgatacggccacggtggaaacgctgggaccggtgctggaa
agccacgaacgctttcctgaacgcgccaacatcggctttatgcaggtggtaaagcgcgag
catatccggctgcgcgtctatgaacgcggggcgggcgaaacgcaggcctgcggcagcgga
gcgtgcgccgctgttgcggtaggtattcagcagggcctgctggcagaagaggtgagggtg
gagttacctggcggtcgacttgatatcgcctggaaaggtccgggtcatccgctgtatatg
actggcccggcggcacatgtctacgacggatttattcacttatga
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