Citrobacter freundii CFNIH1: CFNIH1_04930
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Entry
CFNIH1_04930 CDS
T03077
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfd03021
]
CFNIH1_04930
Transcription machinery [BR:
cfd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFNIH1_04930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_3
2Fe-2S_thioredx
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AHY10885
LinkDB
All DBs
Position
complement(1004073..1004927)
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AA seq
284 aa
AA seq
DB search
MTKEMQNLALAPVGNLESYIRAANAWPMLSADEERALAEKLHYQGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSSDDESDSQPMAPVLYLQDKSSNFADGIEEDNWEDQAANKLTHAMEGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaaatttagctttagcccctgttggtaacctggagtcttacatc
cgggctgcgaacgcgtggccgatgttgtcggctgacgaggagcgggcgctggctgaaaag
ctgcattaccagggcgatctggaagcagctaaaacgctgatcctgtctcacctgcgcttt
gttgttcatattgctcgtaactacgcgggctatggcctgccgcaggcggatctgattcag
gaaggtaatatcggcctgatgaaagccgtgcgccgtttcaacccggaagtgggtgtgcgc
ctggtttctttcgccgtgcactggatcaaagctgagatccatgaatacgttctgcgtaac
tggcgtatcgtgaaagtcgcgaccactaaagcacagcgtaagctgttctttaacttgcgt
aaaaccaagcagcgtctgggttggttcaaccaggacgaagttgaaatggtggctcgtgag
ctgggtgtttccagcaaagacgtgcgcgaaatggaatcccgtatggcggcgcaggacatg
acgtttgatatgtcttcagacgacgagtctgacagccagccgatggcgccggttctgtat
ctgcaggataaatcctctaactttgccgatggcattgaagaagataactgggaagatcag
gccgcgaacaaactgactcacgcaatggaaggtctggacgaacgtagccaggatatcatc
cgcgcccgttggctggacgaagacaacaagtcaacgttgcaggaactggccgatcgctac
ggcgtttccgctgaacgtgttcgtcagcttgaaaagaacgccatgaaaaaactgcgcgcg
gcgatcgaagcgtaa
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