Citrobacter freundii: CFNIH1_05375
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Entry
CFNIH1_05375 CDS
T03077
Name
(GenBank) LacI family transcriptional regulator
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
cfd
Citrobacter freundii
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfd03000
]
CFNIH1_05375
Transcription factors [BR:
cfd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CFNIH1_05375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_31
HTH_3
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AHY10964
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All DBs
Position
1102649..1103665
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AA seq
338 aa
AA seq
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MSKSTRATISDVAKAAKTGKTSISRYLNGEKHLLSDALLARIEQAIADLDYRPSLMARGL
KHGRTRLIGLIIADITNPYSVNVLSGIEAACRDKGFTPLVCNTNNEVDQELHYLDLLRSY
QVEGIVVNAVGMREEGLNRLQQSALPMVLIDRKIPDFACDMVGLDNTQAATIATEHLLEQ
GFEAILFLSEPLGMVNTRRERLSAFRATLARYPGVIAQNAEVPLTDNAQLDDTLRQFHQQ
HRGMRKAVISANGALTLQVARALKRIGLNWGSDIGLLGFDELEWAELAGVGITTLKQPTW
QIGYTAVEQVVRRIDGGSDAIQEQVFSGELIVRGSTAR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcaacacgggcaaccatcagcgatgtggcaaaggccgcaaaaaccggcaag
accagcatttcacgctacctcaacggtgaaaagcacctgctttccgacgcgctgctggcc
cgcattgaacaagccattgccgatctcgactaccgacccagcctgatggcacgcggcctg
aaacacggtcgcacccgcctgattggcctgatcatcgccgatattaccaatccctactct
gtcaacgtattaagcggaattgaagccgcctgtcgcgataaaggctttaccccgctggta
tgtaacaccaacaacgaagtggatcaggagttgcactatcttgacctgttgcgcagttac
caggtcgaagggattgtggtcaacgccgttgggatgcgtgaagaggggctgaaccgcctg
caacagtctgcgctaccgatggtactaattgatcgtaaaatacctgatttcgcctgtgat
atggtcggactggataacacccaggccgcaacgattgccacggaacacctgcttgaacaa
ggctttgaagccattctgtttctcagcgaaccactcggcatggtgaatacccgccgcgaa
cgtttgagcgcctttcgcgccacgctcgcacgctaccccggcgttatcgcgcaaaatgcc
gaagttccgctaacggacaatgcgcaactggatgacacgctgcgccagttccaccagcag
catcgaggcatgcgcaaagccgttatctccgccaacggcgccctcacgctacaggttgcc
cgcgccctgaaacgcattggcctcaactggggcagcgatatcggcctgctcgggtttgac
gagctggaatgggccgagctggcgggtgtcggcattaccacgctgaaacaacccacctgg
cagattggctacaccgccgtggaacaggttgtacgccggatcgatggcggttctgatgcc
attcaggagcaggttttctctggtgaattgatcgtgcgcggatctaccgcccgttaa
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