Citrobacter freundii CFNIH1: CFNIH1_08965
Help
Entry
CFNIH1_08965 CDS
T03077
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfd03000
]
CFNIH1_08965 (treR)
Transcription factors [BR:
cfd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CFNIH1_08965 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_23
HTH_IclR
HTH_31
HTH_7
MarR_2
Peripla_BP_4
AAA_18
HTH_Tnp_ISL3
HTH_26
HTH_28
HTH_Crp_2
TrmB
MarR
CENP-B_N
HHH
HTH_17
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AHY11632
LinkDB
All DBs
Position
complement(1852703..1853650)
Genome browser
AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPELVEEHLGMLRRRNID
GVVLFGFTGITETMLTSWQDSLVLLARDAKGFASVCYDDEGAIHTLMQRLYDRDHRHISF
LGVPHSDVTTGKRRHEAYLAFCKKHKLHPVAALPGLAMKQGYEQAANVITPETTALVCAT
DTLALGVSKYLQEQRIDNLQLASVGNTPLMKFLHPEIITVDPGYAEAGRQAASQLIEQIN
GRSEPRQIVIPSTLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccattaaagacatcgcccgcttaagcggcgtggggaaatccacg
gtttcccgcgttctcaacaacgaaagcggcgtcagcgaacgtacccgcgaacgcgtcgaa
gcggtgatgaatcagcacggtttttccccttcccgctccgcacgcgccatgcgtgggcaa
agcgacaaggtggtggcgattatcgtcactcgcctggattctctttcagaaaatctcgcc
gtgcagaccatgctgcccgctttttatgaacagggttacgatccgatcatgatggaaagc
cagttctcgcctgaactggtcgaagaacatctgggcatgctcagacgccgtaatattgac
ggtgtggtgctgtttggttttaccggcattaccgaaacgatgctcacctcctggcaggat
tctctggtactgctggccagagatgccaaaggctttgcctccgtctgctatgacgatgag
ggcgctattcataccctgatgcaacgtttatacgatcgcgaccaccgccatattagcttt
cttggcgtcccccatagcgacgtgaccaccggtaagcgccgtcatgaagcctacctggca
ttctgtaagaaacacaaactgcatccggttgccgcgctaccgggcctggccatgaagcag
ggctatgagcaggccgccaatgtcatcaccccggaaaccaccgccttagtctgtgcgacg
gatacccttgcccttggggtcagcaaatatctgcaggagcagcggattgataatctgcag
ttggcgagtgtgggcaacacaccgctaatgaaattcctccatccggaaattatcaccgtc
gatcccggttacgccgaagccggacgacaagcggcctcgcagctgatcgagcagatcaac
ggccgtagcgaaccgcgacaaatcgttattccctccaccctcgcctga
DBGET
integrated database retrieval system
