Citrobacter freundii CFNIH1: CFNIH1_09090
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Entry
CFNIH1_09090 CDS
T03077
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfd03400
]
CFNIH1_09090
DNA repair and recombination proteins [BR:
cfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CFNIH1_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_16
AAA_30
T2SSE
AAA
AAA_7
AAA_19
AAA_25
CbiA
nSTAND_NTPase5
AAA_28
SRP54
AAA_18
nSTAND3
NTPase_1
Hydrolase
Smg4_UPF3
TraG-D_C
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AHY11657
LinkDB
All DBs
Position
complement(1880325..1881827)
Genome browser
AA seq
500 aa
AA seq
DB search
MSAPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK
GDLTGVAQEGQASEKLLARLKNIGITDWQPHANPVTVWDIFGEKGHPVRATVSDLGPLLL
ARLLNLNDVQSGVLDIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV
GAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDASGKGVINILSAEKLYQMPKLYATSLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV
SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKTAAQTMRANPAFDTEKAIQELGTGE
ALISFLDAKGSPSVVERAMVIAPCSRMGPVTDDERNGLINHSSLYGKYEEEVDRESAYER
LQQGVQASTEQQNTPPANGKAIDVDGGILGGLKDILFGSTGPRGGKRDGVVQSVAKSAAR
QVTNQIIRGMLGSLMGGRKR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacccctgctaatagcccgcacgccggacaccgaactgtttttactcccaggc
atggccaaccgtcacgggctgattaccggcgcgaccgggaccggtaaaaccgtcacgcta
cagaaactggccgaatcgctgtctgagattggcgtgccggtatttatggccgacgtaaaa
ggtgacttaaccggcgtagcgcaggaaggacaagcctctgaaaagctgctcgcccgcctg
aaaaacatcggcattaccgactggcaaccgcatgcgaatccggtcacggtgtgggatatc
ttcggcgaaaaaggccacccggtgcgggccacggtctctgacctcgggccgctgctgctg
gcgcgtctgctgaatctcaacgatgtgcagtccggcgtgctggatattatcttccgtatt
gccgatgaccagggtctgttgctgctcgatttcaaagatctgcgggccattacgcagtac
atcggcgataacgctaaatcgttccagaaccagtacggcaacatcagcagcgcctcggtg
ggcgctatccagcgcggactgctgtcgctggaacaacagggagcggcgcacttctttggc
gagccgatgctggatatcaaagactggatgcgcactgacgccagcggtaaaggggtaatc
aacatcctcagcgccgagaagctgtaccagatgcccaaactgtacgccaccagcctgctg
tggatgctctccgaactgtatgaacaactgccggaagccggcgatctggagaagccaaaa
ctggtgttcttcttcgacgaagcccatttgttgttcaacgacgccccgcaggtattgctg
gataaaattgaacaggtaatccgcctgatccgctcgaaaggggtcggcgtgtggttcgtt
tcacaaaacccgtccgatattccggacaacgtactcgggcagttgggaaaccgcgtgcaa
catgccctgcgcgccttcacgccaaaagatcagaaagcggtgaaaaccgcggcgcaaact
atgcgcgccaatccggcatttgataccgaaaaagccattcaggagttgggtaccggcgaa
gcgctaatttccttcctcgatgccaaaggtagcccctcagtggtggaacgggcgatggta
attgcgccgtgctcgcgcatgggaccggtaaccgacgacgagcgcaacgggctgattaat
cactcctcattgtatggaaaatatgaggaagaggtcgaccgtgagtccgcctatgagcgt
ttacagcaaggcgtacaggccagcaccgagcagcaaaatacgcctcccgccaacggtaaa
gcgatcgacgtggatggcggtattctcggggggttgaaagatattctgtttggcagcacc
ggaccacgcggcggtaagcgcgatggcgtagtacagagcgtggcgaaaagcgcggcgcga
caggtcactaatcagataattcgcggcatgttgggaagtttgatgggcggcagaaaacgc
tag
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