Citrobacter freundii CFNIH1: CFNIH1_10000
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Entry
CFNIH1_10000 CDS
T03077
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfd03021
]
CFNIH1_10000
Transcription machinery [BR:
cfd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CFNIH1_10000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
DUF2482
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AHY11825
LinkDB
All DBs
Position
complement(2070999..2073905)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFSSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHVDEVKEENGLLAYIGTRLDTEETGVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFETEQLVICSLDFARRSKQRLEHLCDAEWDLLIVDEAHHLVWSEDAPSREYMAIE
QLAERVPGILLLTATPEQLGMESHFARLRLLDPSRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNMLGDMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVMLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPFLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDTVYNNLIGFLAEPENT
DGFDDLIKTCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLTESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEKSAR
ALIDAARKEADEKLTAELSRLEALRAVNPNIRDDELSAIESNRQQVLESLEQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaactgggacttggt
actgttgtcgccatggatgcgcgaaccgtcactttacttttctcatcgacgggcgaaaac
cgtctgtatgcgcgcagtgattctcccgtgacccgcgtgatgttcaatcctggcgatacg
ataacgagccatgaaggctggcaactgcatgtcgatgaagtaaaagaagaaaacggcctg
cttgcctatatcggaacccgccttgataccgaagaaaccggtgtaacgctgcgtgaagtg
ctgctcgacagtaaactggtattcagcaaaccacaggatcgtctgtttgccggtcagatt
gaccgtatggaccgctttgcgctgcgctatcgcgcgcgtaaatttcagagcgaacagtac
cgtatgccatggagtggtttgcgcggccaacgtaccagcctgatcccccaccagctcaac
attgctcatgatgttggtcgtcgtcacgccccgcgcgttttgctggctgacgaagtgggt
ttaggtaaaaccattgaggccgggatgatcctgcatcagcaactgctttctggcgccgct
gaacgcgtactgatcatcgtcccggagacgctacagcaccagtggctggtcgaaatgctg
cgccgtttcaacctgcgttttgcgctgttcgatgatgagcgttatgcagaagcgcaacac
gacgcctacaacccatttgaaaccgaacagttagttatctgttcgctggactttgcccgt
cgcagtaaacagcgtctggagcacctgtgtgacgccgaatgggatctgctgattgtcgac
gaagcccatcacctggtgtggagcgaagatgcgcccagccgggaatatatggccattgaa
cagctggctgaacgcgtaccgggtatcctgctgttgaccgctacgccagaacaactgggt
atggaaagccactttgcacgtctgcgcctgctggatccaagccgtttccacgatttcgcc
cagtttgttgaagagcaaaaaaattaccgtccggtcgctgatgccgtcgccatgctactg
gctggcaataaactgagtaacgatgagctgaacatgttaggcgacatgattggcgagcag
gatattgagccattattgcaggcagcaaacagcgacagcgaagacgcccagagcgcgcgt
caggaactggtttcgatgctgatggaccgccatggcaccagccgtgtactgttccgtaac
acccgtaacggtgtgaaaggcttcccgaaacgcgaactgcataccatcaaattaccgttg
ccgacccaataccagaccgcgataaaagtctccggcattatgggcgcgcgtaagagtgcg
gaagaccgggctcgcgacatgctctacccggaacagatttatcaggaattcgaaggcgat
accggcacctggtggaactttgatccgcgcgtggaatggctgatgggctacctgaccagc
caccgttcgcaaaaagtgctggttatctgcgcgaaagcgactaccgcgctgcaactggag
caggtcctgcgcgaacgcgaagggatccgcgccgccgtgttccatgaaggaatgtcgatt
attgaacgtgaccgcgcggcggcctggtttagcgaagaagatagcggcgcccaggtgatg
ctgtgttctgaaatcggctccgaggggcgtaacttccagttcgccagcaatctggtgatg
ttcgacctgccgttcaacccggacctgctggaacagcgtattggtcgtctggaccgtatc
ggccaggcacatgatattcagatccacgtaccgttcctggaaaaaaccgcgcaatccgtg
ctggtgcgctggtaccacgaaggtctggatgcgttcgaacacacttgcccaaccggacgt
actatctatgacacggtatacaacaatctgatcggcttcctggctgagccggaaaatacc
gatggctttgatgacctgatcaaaacctgccgtgagcagcacgaggcgctgaaagcccaa
ctggagcaaggccgcgatcgcctgctggaaattcactccaatggtggtgaaaaagctcag
caacttaccgaaagtattgaagagcaggatgacgacaccagcctgatcgcctttgccatg
aacctgtttgatatcgtcggtattaatcaggatgaccgtggcgacaatttaatcgtgctg
acgccgtccgatcatatgctggtacctgatttccctggcctgccggaagatggctgcacc
attacgtttgaacgtgatgtcgccctgtcgcgtgaagacgcgcagtttattacctgggag
catccgctgatccgcaatggtctggatctgatcctgtccggcgacaccggaagcagtact
atttctttattgaaaaacaaagcgttaccggtcggcactctgctggttgaactggtttac
gttgtagaggcgcaagcgccgaaacagctgcagttgaaccgcttcctgccgccaacgccg
gtacgcatgctgctggataaaaacggcaataaccttgccgcgcaggttgaattcgaaacc
tttaaccgtcagctcagcgccgttaaccgccacaccggcagcaaactggtcaacgccgtg
cagcaggatgttcatgccatcctgcagttgggtgaggcgcaggtggaaaaatccgcccgt
gcgctgatcgacgcggcgcgcaaagaagcggatgagaagctgacagcagaactgtcgcgt
ctggaagccctacgtgccgttaacccgaacatccgtgatgacgaactgagcgccattgaa
agcaaccgccagcaggtgttggaaagcctggagcaggcgggctggcgtctggatgccctg
cgtctgatcgtcgtgacgcaccagtaa
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