Citrobacter freundii CFNIH1: CFNIH1_11720
Help
Entry
CFNIH1_11720 CDS
T03077
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfd03000
]
CFNIH1_11720
Transcription factors [BR:
cfd03000
]
Prokaryotic type
Helix-turn-helix
Other families
CFNIH1_11720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
HTH_psq
AAA
AAA_2
AAA_7
ResIII
HTH_23
Xre-like-HTH
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AHY12153
LinkDB
All DBs
Position
complement(2423408..2425018)
Genome browser
AA seq
536 aa
AA seq
DB search
MADTHLPPRVNDDKPVIWTVSVTRLFELFRDISLEFDHLATITPIQLGFEKAVAYIRKKL
ATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQALAKAGKLTSSIGVITYQETIP
ALIAFQKTFNLQLEQRSYITEEDARGQINELKANGTQAVVGAGLITDLAEEAGMTGIFIY
SAATVRQAFVDALDMTRLTLRRNGQYASGDMLRTRYALGDMRGHSAQMEQVRHTIMLYAR
SRAPVLIQGETGTGKELAAQAIHREYFTRQENRRGKPSPPFVAVNCGAITESLLEAELFG
YEDGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPI
PVDVRVISATHCNLEQEMKQGEFRTDLFYRLSILRLKLPPLRERLPDILPLAEGFLKQSL
AELDVPFSEPVRKGLALSQPTLLNYGWPGNIRELRNMMERLALFLSVEPQPALNVQFLQQ
LLPELAAVAAPPQVTSSLTPQQVLAQFNGDKTAAARYLGISRTTFWRRLKENPPVQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgcatcttccgccgcgagtgaacgatgacaaaccggttatctggacggtt
tcggtcacgcgcctgttcgaactgtttcgcgacatcagtctggagttcgaccacctggcg
accattacccctattcagctgggtttcgaaaaagcggtggcctatatccgtaagaagctg
gccaccgagcgttgcgatgccatcattgcggcaggctccaacggcgcgtatctgaaaagc
cgtttatcgattccagtgatcctgattaaacccagcggatttgacgtactccaggcgctg
gcgaaagcgggaaaactgacctcgtcgattggcgtcattacctatcaggaaaccatcccc
gcgctaatcgcctttcaaaaaaccttcaatttgcagcttgaacagcgcagctatatcacc
gaagaagatgcccgtggacaaatcaatgagctgaaggccaacggcacccaggcggtggtc
ggcgcggggttgattaccgatttggcggaagaagcgggcatgaccggcatttttatctat
tcggcggccaccgtgcgtcaggcttttgtcgacgcgctggatatgacccgtctgacgctg
cgcagaaacgggcaatacgcctctggcgatatgctgcgcacccgctatgcgctgggagat
atgcgcggtcactctgcgcaaatggaacaggtgcggcacaccattatgctctacgcccgt
tcgcgtgcgccggtgctgattcagggtgaaaccggcacaggcaaagagctggcggcgcag
gctattcatcgtgaatatttcacacgtcaggagaatcggcgaggaaaaccttcgccgccg
tttgttgccgtcaactgtggtgccatcaccgaatcattgttggaagcggagctgttcggc
tatgaagatggcgcgtttaccggctcccgccggggaggacgcgcgggcctgtttgaaatt
gcccacggcgggacgctgtttcttgatgagataggcgaaatgccgctaccgttacaaacc
cggttattgcgcgtgctggaagaaaaagaggtcacccgggtcgggggacatcagccgatt
ccggtcgatgtacgggtgattagcgccacgcactgcaacctggaacaagagatgaaacag
ggagaatttcgtaccgatctgttttaccgcctgagcattctgcgcctcaaactgccgccg
ctacgcgagcggctgcccgatattctgccgctggcggaaggctttttaaaacagtcgctg
gcagaactggatgtaccgttttctgaacccgtgcgtaagggattagccctgagccagcct
acgctgctcaattatggctggccgggaaatatccgcgagttacgcaatatgatggagcgt
ctggcgctgtttttaagcgtcgaaccgcagccggcgctgaacgtacaatttctacagcag
ctattacctgaactggccgctgttgctgccccaccgcaggtcacttcatcactgacgccg
cagcaggtgctggcgcaattcaatggcgataaaaccgcggctgcgcgatatctcggtatc
agcagaactacgttctggcgcaggctaaaagaaaacccgccagtgcaatga
DBGET
integrated database retrieval system
