Citrobacter freundii CFNIH1: CFNIH1_12510
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Entry
CFNIH1_12510 CDS
T03077
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cfd
Citrobacter freundii CFNIH1
Pathway
cfd03030
DNA replication
cfd03430
Mismatch repair
cfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFNIH1_12510
03430 Mismatch repair
CFNIH1_12510
03440 Homologous recombination
CFNIH1_12510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfd03032
]
CFNIH1_12510
03400 DNA repair and recombination proteins [BR:
cfd03400
]
CFNIH1_12510
Enzymes [BR:
cfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFNIH1_12510
DNA replication proteins [BR:
cfd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFNIH1_12510
DNA repair and recombination proteins [BR:
cfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFNIH1_12510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_16
AAA_2
ResIII
AAA_14
AAA_assoc_2
AAA_7
PIF1
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHY12308
LinkDB
All DBs
Position
2603334..2605262
Genome browser
AA seq
642 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILKQEHIAHEPRALQLLARAADGSLRDALSLTDQAIASGDGQVSTDAVSAM
LGTLDDDQALSLVEAVVAADGERVMTLVNDAAARGIEWEALLVEMSALLHRIAMVQLSPA
ALGSDMAAIEQRMRELARIVPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPQQSAPAQQQQNVPLSEATSQVLAARSQLQR
AQGATKPKKSEPAAASRARPVNNAALERLASVSERVQARPAVSALEKAPAKKEAYRWKTT
NPVAEVKEAIATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVAL
NAWKEENGNVVCLHLRSSQRHLNSSGAQQKLAEALSTLTGSTVELTIVEDDNPAVRTPLE
WRQAIYEEKLAQARESIIADNNIQTLRRFFDADLDEESIRPI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtcttagcccgaaaatggcgcccacaaacctttgctgacgttgtcggc
caggaacatgtgctgacggcactggcgaacggcttgtcgttagggcgtattcatcatgct
tatctgttttccggcacccgtggcgtcgggaaaacctctatcgcccgtttgctggcgaag
ggactaaactgtgaaaccggtattaccgccacgccgtgcggcgtgtgcgataactgccgt
gaaatcgagcaggggcgttttgtcgatctgattgaaatcgacgccgcctcacgcaccaaa
gtcgaagacacccgcgacctgctggataacgtccagtacgcgcctgcgcgcggtcgcttt
aaggtctatttgatcgacgaagtgcacatgttatcgcgccacagctttaacgccttgctg
aaaacgctcgaagagccgcctgcacacgttaaattcctgctggcgaccaccgatccgcag
aagttaccggtgactatcctgtcgcgctgtttgcaattccatcttaaagcgctggatgtt
gaacagattcgccatcagcttgagcatatcctcaaacaagagcatatcgcccatgagcca
cgcgcgttgcaactgctggcccgcgccgcggacggcagcctgcgcgatgcgctgagtctt
accgatcaagcgatcgccagcggcgatggtcaggtgtcgaccgacgcggtgagcgccatg
ctcggcacattggacgatgaccaggcgctctcgcttgttgaagcggttgtcgcggctgac
ggcgaacgcgttatgacattggtgaacgacgccgccgcgcggggtattgaatgggaagcg
ctgctggttgagatgtcggctttgctgcatcgcattgctatggtacagctttcgcccgcc
gcgctcggcagcgatatggccgccattgaacagcgtatgcgcgaactggcgcgaatcgtt
ccgccaactgacatacagctttactaccaaaccctgttaatcgggcgcaaagaactgccg
tatgcgccggacaggcgaatgggcgtcgaaatgacgctactgcgtgcgctggcttttcat
ccgcgcatgccactgccggagcctgaagtcccgcgccagtcgtttgcccccgtcgcgccg
actgcggtgatgaccccgacgcaagtacctcagcagtctgcgccagcgcaacagcaacag
aatgtgccgctctccgaggccaccagccaggtgctggcggcgcgcagccaactgcaacgc
gctcagggagcaaccaaaccaaaaaagagtgaaccggcagccgcttcccgcgcgcggccg
gtgaataatgctgcgctggaaagactggcctcggtgtcggagcgtgttcaggcgcgtccg
gccgtctctgcgctggaaaaagcgccggcgaagaaggaagcgtatcgctggaaaacgacc
aatcccgtagccgaagttaaagaagccattgccacgccgaaagcgttgaaaaaagcgctt
gagcatgaaaaaacgccggaactggcggcaaagctggcggcagaagccattgagcgcgac
ccctgggctgctcaggtgagccagctttcgctgcctaaactggtggagcaggtggcgctt
aatgcctggaaagaagagaatggcaacgtggtttgcctgcacctgcgttcctcgcaacgg
catcttaattccagcggcgcgcagcaaaaactggccgaagcattgagtaccttaacgggg
tcaacggttgaattgaccatcgttgaagatgataatcctgcggtgcgcacgccgctggag
tggcgtcaggccatttatgaagagaaactcgcgcaggcgcgtgagtcgattattgcggat
aataacattcagacgctgcgtcgttttttcgatgcagacctggacgaagagagtattcgc
cccatttga
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