Citrobacter freundii CFNIH1: CFNIH1_13615
Help
Entry
CFNIH1_13615 CDS
T03077
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfd03400
]
CFNIH1_13615
Enzymes [BR:
cfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CFNIH1_13615
DNA repair and recombination proteins [BR:
cfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CFNIH1_13615
Prokaryotic type
CFNIH1_13615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHY12514
LinkDB
All DBs
Position
2840910..2842328
Genome browser
AA seq
472 aa
AA seq
DB search
MTTHLVWFRRDLRLHDNLALAAACRDRSAQVLALYISTPGQWKAHDMAPRQAAFVNAQLN
ALQTALAEKGIPLLFHEVADFAASVDTVKRVCLQHDVSRLFYNYQYEINERQRDANVEKS
LPQVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRIKDGIPECVSAPKMRESGA
LDAPLTSITLSYPQQDFDAQRFVAEEKLAIAQLRQFCQQAAGKYEQQRDFPAIDGTSRLS
ASLATGGLSPRQCLNRLLAEQPQALEGGAGSVWLNELIWREFYRHLMTYHPALCRYQPFI
RWTDRVQWQNNPTHLQAWQTGQTGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRKGEQYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDRDGEFIRQW
LPELRDVPGKAIHEPWSWAEKAQVTLNYPRPIVDHKQARLATLAAYEAARKG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatttggtctggtttcggcgtgatttacgtctgcacgacaacctcgcgctg
gcggcggcttgtcgggatcgttctgcgcaggtgctggcgttatatatatctacccccggg
cagtggaaggcccacgatatggccccgcgtcaggcggcatttgtcaacgcgcagttgaat
gcgttacaaacggcgctggcagaaaaaggcatccctttactgtttcatgaagtggctgat
tttgcggccagcgtggacaccgtcaaacgtgtctgcctgcagcatgacgtcagtcgatta
ttttataactatcaatatgaaataaacgaacgacagcgtgatgcaaacgtagagaaatca
ttaccccaggtggtgtgcgaagggtttgatgacagcgtgatcctgcctcctggagcggtg
atgaccggcaatcatgagatgtataaagtgttcacgccgtttaaaaatgcctggctgaag
cggattaaagacggtattccagaatgtgtgagcgcgccaaaaatgcgagaaagcggcgct
cttgacgcaccgttaacatcaataacgctgagctatccgcagcaagattttgatgcccaa
aggtttgtggcagaggaaaaattggccatcgcgcaattacgccagttttgccagcaggct
gcgggaaaatacgaacagcagcgtgattttcccgcgattgacgggaccagtcgattatcc
gcaagcctggcgacaggcgggttatcgccgcgccaatgcctgaatcgactgctcgcagag
cagccgcaggcgcttgagggcggggcgggcagcgtctggctgaacgagcttatctggcgt
gaattttatcgtcatctgatgacgtatcatccggcgctgtgtcggtatcaaccctttatc
cgctggaccgatcgcgtgcaatggcagaataacccgacgcatttgcaggcctggcaaacg
ggtcaaacgggttacccgattgtggatgcggcgatgcgtcagctcaacgccacgggctgg
atgcataatcgtttacgcatgattacggccagttttttagtaaaagacctgctgatcgac
tggcgtaaaggggagcagtatttcatgtcgcaactgatcgatggcgacctggcggccaat
aacggcggctggcagtgggccgcatccaccggaaccgatgccgcaccgtatttccgcata
tttaaccccacgacgcagggcgaaaaatttgaccgtgacggtgagtttatccgccagtgg
ctgccggaattgcgcgatgtgccgggtaaagccatccatgagccgtggtcgtgggcggaa
aaagcgcaggtgacgctcaactatcctcgcccgattgtcgatcataagcaggccagactg
gctacgctggcggcatatgaggcggcgcgaaaagggtaa
DBGET
integrated database retrieval system
