Citrobacter freundii CFNIH1: CFNIH1_19385
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Entry
CFNIH1_19385 CDS
T03077
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
cfd
Citrobacter freundii CFNIH1
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfd03036
]
CFNIH1_19385
03400 DNA repair and recombination proteins [BR:
cfd03400
]
CFNIH1_19385
Chromosome and associated proteins [BR:
cfd03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
CFNIH1_19385
DNA repair and recombination proteins [BR:
cfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFNIH1_19385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
PaaX_C
DUF6626
DUF6280
TetR_C_24
Motif
Other DBs
NCBI-ProteinID:
AHY13610
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All DBs
Position
3998454..3998867
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AA seq
137 aa
AA seq
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MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVSERREEESAAAAEVEERTRKLQQ
YREMLIADGIDPNELLNSMAAVKSGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIK
KAMEEQGKQLDDFLIKE
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattctgaacaacatccgtactcttcgtgcgcaggcaagagaa
tgtactctggaaacgcttgaagaaatgctggaaaaattagaagttgtagttagcgagcgt
cgtgaagaagaaagcgctgccgctgctgaagttgaagaacgtactcgtaaactgcaacaa
tatcgtgaaatgctgattgctgacggtattgatccgaacgagctgctgaatagcatggct
gctgttaaatctggcaccaaagctaaacgcgctgcgcgtccggctaaatatagctatgtt
gacgaaaacggtgaaactaaaacctggactggccagggtcgtacaccggctgtgatcaaa
aaagcgatggaagaacaaggtaaacaactggacgatttcctgatcaaggaataa
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