Citrobacter freundii CFNIH1: CFNIH1_20375
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Entry
CFNIH1_20375 CDS
T03077
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
cfd
Citrobacter freundii CFNIH1
Pathway
cfd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFNIH1_20375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfd03400
]
CFNIH1_20375
DNA repair and recombination proteins [BR:
cfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CFNIH1_20375
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AHY13794
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All DBs
Position
4186061..4186723
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AA seq
220 aa
AA seq
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MLRIIDTETCGLQGGIVEIASVDVVDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVAD
KPWIEDIIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLSRRLWPGIKYSNMALYKS
RKLNVQTPAGLHHHRALYDCYITAALLIDIMQTSGWTAEQMVDITGRPALLTTFTFGKYR
GKPVSEVAERDPGYLRWLFNNLDSMSPELRLTLKHYLDNI
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcataatagatacagaaacctgtggtctgcagggaggcattgttgagattgct
tctgtcgatgtggttgatggaaagatagttaacccaatgagtcacctggtgcgccctgac
cgccccattagcccccaggcgatggctattcatcgcattactgaagcgatggtagccgat
aagccatggattgaagatatcattccgcactattacggtagcgagtggtatgtggcgcac
aacgcaagtttcgaccgccgcgtattgccagagatgcccggagagtggatctgcaccatg
aagctctcccgtcgattgtggccaggaatcaaatacagcaatatggcgctgtacaaatca
cgtaagctgaacgttcagacgcctgcaggcctgcatcaccaccgcgctctgtacgattgc
tacatcactgcggctttgctgatcgacatcatgcagacttcaggctggaccgcagagcag
atggtcgacattaccggccgccccgcattactcactactttcacatttggtaagtaccgt
ggaaaaccggtatcagaggtggcagaacgcgatccgggctatctgcgttggttatttaat
aacctcgacagtatgagcccggagctgcgattaacgctgaagcactatctggataacatc
tga
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