Chlamydia felis Fe/C-56: CF0025
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Entry
CF0025 CDS
T00332
Symbol
topA
Name
(GenBank) DNA topoisomerase I-fused to SWI domain
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cfe
Chlamydia felis Fe/C-56
Brite
KEGG Orthology (KO) [BR:
cfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfe03032
]
CF0025 (topA)
03400 DNA repair and recombination proteins [BR:
cfe03400
]
CF0025 (topA)
Enzymes [BR:
cfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CF0025 (topA)
DNA replication proteins [BR:
cfe03032
]
Prokaryotic type
DNA Topoisomerases
CF0025 (topA)
DNA repair and recombination proteins [BR:
cfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CF0025 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
SWIB
Toprim
Phage_TTP_14
Zn_ribbon_DUF2089
Motif
Other DBs
NCBI-ProteinID:
BAE80797
UniProt:
Q256J1
LinkDB
All DBs
Position
complement(22964..25552)
Genome browser
AA seq
862 aa
AA seq
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MKKSLIVVESPAKIKTLQKLLGKGFIFASSLGHVVDLPAKTFGIDIEHDFEPDYQILPDK
QEVINQICKLASSCDVVYLSPDPDREGEAIAWHIANQLPKNTQIQRVSFNAITKGAVNEA
LKHPREIDMALVNAQQARRLLDRIVGYKISPILSRKLQQRSGISAGRVQSVALKLVVDRE
KAIEAFVPTEYWNIRVFLQDPKTSKTFWAHLYSADGKKWEKELPKGKTEDEILLINSEAK
AQHYAELLEDASYRVTRVEAKEKRRNAAPPFITSTLQQEASRHFRFSSSKTMSVAQTLYE
GVELDNEDATGLITYMRTDSVRIDPEALNNVRDYIQDTFGQEYLPKTPNLYTSKKMTQDA
HEAIRPTDIHLSPDKLQGKLTNDQHMLYSLIWKRFVASQMNPAIYDTLAMTISTNVKIDL
RASGSLLKFKGFLAVYEEKIDDDVAEEENPSLPQLHAQDILDKEKVSAEQAFTKPLPRFT
EASLVKELEKSGIGRPSTYATIMNKIQSREYTIKENQRLRPTELGKIISQFLETNFPRIM
DIGFTALMEDELELIADNKKSWKLLLKEFWDQFLPVVTTAEKEAVIPRVVTDIDCSACHK
GKLVKIWAKNRYFYGCSEYPECDFKTSEEELAFNKDDYAVETPWDSPCPVCGGEMKVRHG
RFGTFLGCLNYPKCRGTISLHKKGEEVETEEPIPCPAIGCSGKIFKKRSRYNKTFYSCSE
YPDCSVIGNTIDAVITKYTGTQKTPYEKKTTSKKKSTTKASSKTTKTTAKKKKSAKETTK
TPKAGSLLIPSPQLAQMIGNEPVARGEATKKIWKYIKDHNLQSPENKKMLIPDDKFRGVI
GPEPVDMFQLPKLLNQHLFKSG
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatccttaatcgtagtggaatctcccgctaaaataaaaaccttgcaaaagctc
ttagggaaaggttttatttttgcttcatcactaggacatgttgttgatcttcctgctaag
acgttcggtatcgatatcgagcatgatttcgaaccagattatcaaattcttcctgacaaa
caagaagttatcaatcaaatttgcaaattagcttccagttgtgacgttgtctatctatct
cctgaccccgatagagaaggagaagctatagcctggcatattgcgaatcagcttcccaaa
aatacacagattcaaagggtttcctttaatgcaattaccaaaggcgctgttaatgaagct
ctaaagcatcctcgagaaatcgatatggctttagtaaatgcccaacaagcccgccgccta
ttggaccgtattgtgggatataagatctcccctattctaagtcgcaaacttcagcagcga
tcgggaatatccgccggacgtgtgcaatctgttgcgctaaagcttgttgtagatcgcgaa
aaagccatagaagccttcgttcccactgaatactggaatattcgcgtttttctccaagat
cccaaaacctcaaaaacattttgggcgcatctatattctgcggatgggaagaaatgggaa
aaggaactccctaaagggaaaacagaagatgaaattctgttaattaactccgaagctaaa
gcccaacattatgctgagcttttagaagacgcttcttacagggtgactcgcgtagaagct
aaagaaaaacgacgtaatgctgcaccaccctttattacctcgactttgcaacaggaggcg
agccgccatttcagattttcttcttcaaagacaatgtcggttgctcaaacattatatgaa
ggcgttgaattagataacgaagatgcaacaggattaattacatacatgcgtactgattcc
gtacgtatagaccctgaggcattaaataatgttagggattatatacaagatacgtttgga
caagagtatcttccaaaaactcctaatctttatacatcaaaaaagatgactcaggatgcc
catgaagcaattcgtcctacagatattcatttatctccagataaactccagggaaaactg
actaacgatcagcatatgctctattctctcatttggaaacgtttcgtagcctcacagatg
aatcctgcgatttatgatacgttagctatgacgatttccacaaatgtgaaaatagaccta
cgtgcttctggatctttgctgaaatttaaaggtttccttgccgtatacgaagaaaaaata
gacgatgatgtagccgaagaagaaaacccctctcttcctcagctacacgctcaagatatt
ttagataaggaaaaggtttctgcagaacaagccttcacaaaacctcttccgagatttaca
gaggcctctttagtaaaagaactggaaaaatctggtattggccgtccttctacatacgca
acgattatgaataaaattcaaagtcgtgagtatacaattaaggaaaaccagcgcctacgc
cctacagaactaggaaaaatcatttcacagttccttgagacaaattttcctcgaattatg
gatataggttttacagctcttatggaagatgagctagaacttatagctgacaataaaaaa
tcctggaaattgcttcttaaagagttctgggatcagtttcttcccgtagtaactactgca
gaaaaagaagctgttataccccgtgttgtgactgacatcgattgttcagcatgccataaa
ggaaaacttgtaaaaatctgggcaaaaaatcgctatttttatggatgctcagaatatcct
gaatgcgattttaaaacttctgaagaagagctcgcttttaataaagacgactatgctgtt
gagactccatgggatagtccttgtcctgtttgtggaggggaaatgaaggtccgccatgga
cgtttcggtacatttttgggatgcctaaactatcctaaatgtcgcggcacaatttccctc
cataagaaaggagaagaagtagaaacagaagagccgattccttgcccagcaattggttgc
tctggaaaaatctttaaaaagcgctcccgttacaataaaacgttctattcttgctcagag
tatcccgattgcagtgtgatcggcaatactatcgatgctgttataacaaagtatacagga
acgcagaagaccccttacgaaaagaaaactacaagtaagaaaaaatccacaacgaaagca
agtagcaaaactacgaaaacaacagcaaagaaaaagaaaagtgctaaggaaacaaccaaa
actcctaaagcaggatctctacttatcccctctcctcaacttgctcaaatgatcggtaac
gagccggtagcacggggggaagcgactaagaaaatctggaaatatatcaaggaccataat
ctccagtcccccgaaaataaaaagatgttaattcctgacgataaattccgaggggttatt
ggcccagaacccgtggatatgttccaactgcccaaactactaaatcagcacttgtttaag
tctggttga
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