Chlamydia felis Fe/C-56: CF0579
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Entry
CF0579 CDS
T00332
Symbol
rpoF
Name
(GenBank) DNA-directed RNA polymerase sigma 28
KO
K02405
RNA polymerase sigma factor FliA
Organism
cfe
Chlamydia felis Fe/C-56
Pathway
cfe02020
Two-component system
cfe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CF0579 (rpoF)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CF0579 (rpoF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfe03021
]
CF0579 (rpoF)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cfe02035
]
CF0579 (rpoF)
Transcription machinery [BR:
cfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CF0579 (rpoF)
Bacterial motility proteins [BR:
cfe02035
]
Flagellar system
Flagellar assembly proteins
Stator
CF0579 (rpoF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
Sigma70_ECF
TnsD
YceM-like_C
Motif
Other DBs
NCBI-ProteinID:
BAE81351
UniProt:
Q254D7
LinkDB
All DBs
Position
complement(679344..680117)
Genome browser
AA seq
257 aa
AA seq
DB search
MKTQNTQNISEIWELYWETQKIEYRDTLIDLYLHLVKCVVHRLISGMPSHIKTEDLYASG
VEGLVRAVERFNPEKSRRFEGYALFLIKAAIIDDLRKQDWVPRSVHQKANKLSDAMDTLR
QSLGREPTDGDLCEYFQISQQELSGWFVSARPALIISLNEERPLLSDGESGVALEERIPD
ERAETGYDIVDRKEFSSFLANAIEGLEEKERKVMALYYYEELVLKEIGKILGVSESRVSQ
IHSKALIKLRASLSAFL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacacaaaatacgcaaaacatttctgagatttgggaattatattgggaaactcaa
aagatcgagtatcgtgatactttgatcgatctttatctgcatttagtcaagtgtgttgta
catcgcttgatttcaggtatgccctcccatataaaaaccgaggatctttacgcttccggg
gttgaggggttagtgcgtgctgtcgaacgctttaatcctgaaaaaagtcgtcgatttgaa
gggtatgcgttatttttaatcaaagctgcaattatcgatgatctaagaaaacaggactgg
gtgccaagaagcgtgcatcaaaaggccaataagctttctgatgccatggatactttacgg
cagtcattaggcagagaacccacggatggtgatctttgtgaatattttcaaatctctcag
caagagctttccggctggttcgtttcggcacgtcctgccttgattatatccttaaatgag
gaaaggcccttgctatctgatggtgagtccggagtggctttagaggagcgtattcctgat
gaacgagctgaaacagggtatgatattgtagatagaaaagagttctcctcgtttttagca
aacgctatagagggccttgaggaaaaggaacgaaaagtcatggccctgtactattacgaa
gagctagttcttaaggaaattggaaaaattcttggagttagcgaatcacgagtatctcag
attcattcgaaggccctcattaaacttcgggcgtcgttatcagcttttctctaa
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integrated database retrieval system
