Chlamydia felis Fe/C-56: CF0766
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Entry
CF0766 CDS
T00332
Symbol
vacB
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
cfe
Chlamydia felis Fe/C-56
Pathway
cfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CF0766 (vacB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfe03019
]
CF0766 (vacB)
03016 Transfer RNA biogenesis [BR:
cfe03016
]
CF0766 (vacB)
Enzymes [BR:
cfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CF0766 (vacB)
Messenger RNA biogenesis [BR:
cfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CF0766 (vacB)
Transfer RNA biogenesis [BR:
cfe03016
]
Prokaryotic type
tRNA degradation factors
CF0766 (vacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1CSD-TOTE-2
Clathrin
Motif
Other DBs
NCBI-ProteinID:
BAE81538
UniProt:
Q253K0
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All DBs
Position
911361..913391
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AA seq
676 aa
AA seq
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MRKIKKRRPKVFKRSTKQILLSGILFVHAKKGFGFVTPDHPEEYPFDIFIPARDLKGALD
GDHVIVSLFPHSKEGEKRKGVIHQVVSRGKTVLVGTITSIIDETTALVCVNVLGPDVPVK
AKLIPKRSYKIGDRLLLSTPEWKEKPESKEPPPLQMLEFIGNISNAKSDFPCIKAEFAIE
EDFPDAVIEETNHFSQKHIAQALRSRKDLRDLLCFTIDSITAKDFDDAVSLTYDHNDNYI
LGVHIADVSHYVTPHSALDQEASKRCNSIYFPGKVIPMLPPALSDNLCSLKPNVDRLAVS
VFMTFTKSGHLSNYEIFRSVIRSKYRMTYDEVDEIVENKQPHPISKTLLAMAELSEKFAD
IREKRGCIRLILPSFTMALDNLQEPTALIETRQTLSHKLIEEFMLKANEVIAYHISHQGF
SLPFRIHESPNDESLLSFQEMAKAMGFDIIMTPTQEPDYQYLLQESSSGHPLEPILHSQF
VRSMKTASYSTENKGHYGLKLDFYTHFTSPIRRYIDLVVHRLLFHPMSIEETRLEHIVRA
CSSQERIAAKAEFAFENLKKTRFLNKFLQEQPETIYKAYIITTTPEGISFTVPEFCQEGC
IPTAQLPKEYALTKKTSPDDLPSKLRPGATIEVKLSEVNLLNQAITWSLVTKKIRTPKKQ
PTKEQTPKTRRKRKTE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaaaataaaaaaaagaagacctaaagtctttaaacgaagcactaagcaaatccta
ctctccggaatcctatttgtgcacgcaaaaaaaggttttggatttgttactcctgaccat
ccagaggaatacccttttgacattttcattcctgcgagagaccttaaaggtgctttagat
ggagatcatgttatcgtctcccttttcccccattctaaagaaggagaaaaaagaaaagga
gttattcatcaagttgtatcaagaggaaaaactgttcttgtaggaactataacctcaatt
attgacgaaactactgctcttgtttgtgtgaatgttttaggcccagatgtccctgtaaaa
gctaaacttatccctaaacgctcttataaaattggagatcgtttacttctcagcacgccc
gaatggaaagaaaagccagaatctaaagaacctccacctctacaaatgcttgaatttatt
gggaatatctccaatgccaagtctgatttcccctgtataaaagcggaatttgcaatcgaa
gaagacttcccagatgctgttatcgaagaaaccaaccacttctcccaaaagcatatcgcc
caagcactaagatcacgcaaggacctccgtgacctcctctgcttcacgattgactccata
acagcaaaagatttcgatgatgctgtgtcattaacctatgaccataatgacaactacatt
cttggcgtccatattgcagacgtttcccactacgtaacccctcattctgctctagatcaa
gaagcaagtaaaagatgtaactcaatttactttcctgggaaagtgatccctatgttacct
ccagcactttctgacaatctctgtagcttaaaacctaatgtagatcgacttgccgtttcc
gtgttcatgacatttacaaaatcaggtcatctatccaattacgaaatattccgcagtgtg
attcgtagtaaataccgcatgacctacgacgaagtggatgaaattgtagaaaataaacaa
ccccatcccatttcaaaaactctccttgccatggcagagctaagcgaaaaattcgcagat
atcagagaaaagcgcggctgcatacgcctgattcttccctcatttaccatggcactagac
aatctacaagaacccaccgctcttatagaaacccgacaaaccttgtcgcataaacttatc
gaagagtttatgctcaaagctaacgaagtcattgcctaccatatttcccatcaagggttc
tcactgccattcaggattcatgaatctccaaatgatgaaagtttactctccttccaagaa
atggccaaagctatggggtttgatataatcatgaccccaactcaagaacccgattatcaa
tacttgcttcaagaaagctcttcaggacaccctttagagccaattctacattcacaattt
gtccgaagcatgaaaaccgcctcgtactccacagaaaacaaaggccattacggactgaaa
ctcgacttctatactcattttacaagccctattcgccggtatatcgatcttgttgttcac
agactgcttttccaccctatgtccatagaagaaacacgcttagaacacattgtaagagcc
tgctcttcccaagagcgtatagccgcaaaagccgaatttgcttttgaaaatctgaaaaaa
acacggttcttaaataaattcttacaagaacagccagaaacaatttataaagcctacatt
atcactacaactcccgaaggaatttcgtttactgttcctgagttttgccaagaaggatgc
attcctacagctcaactgcctaaagaatacgctctgacaaagaaaacttctcctgacgat
ctcccaagcaaactccgcccaggagcaacgatagaagtcaaactctccgaagtcaatctc
ctcaatcaggcaattacctggtccttggtaacaaaaaaaataaggacacccaaaaaacaa
cccacaaaggaacaaacacctaaaactcgaagaaaaaggaaaacagaataa
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