Chlamydia felis Fe/C-56: CF0802
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Entry
CF0802 CDS
T00332
Symbol
pmp20
Name
(GenBank) polymorphic outer membrane protein B
Organism
cfe
Chlamydia felis Fe/C-56
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Chlam_PMP
ChlamPMP_M
Autotransporter
PKD_4
Motif
Other DBs
NCBI-ProteinID:
BAE81574
UniProt:
Q253G4
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Position
944373..949994
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AA seq
1873 aa
AA seq
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MKWLSATAVFAAVLPSITVFCDPLSKELNSNYRGSGSSTADARLTNFTQQTQDASGITYL
VSGDVSFSNFTNIPDPKPQPPSTEPETSPETKDSAAKSSESSNPASITQNIAHLQTQLYQ
SLFQSLGSSSFAPHFSDRDQGNLDLSNYLFSNIHSLSFPFTASAGSTTTTTTTPEDPKGG
GAFYNDKDGPLSFTTYAGNPGSLSCSLIKMKGKGGAIYSKGPISFDGLENLTFKDNLSQQ
SGGALFTDSTLTIRNILNSIEFTTNAARVPIPLIPIQPAPTNPPAGSAVTGTLLASDSSE
KKAANTSPTLPVYTTETAGNGGAAFATGAMLITTYKDMTFRRNSAEFPAIIDTIQATIDA
NKNKVVSAVPKSSQIISAAQPSQGSTTPEVIKGSGGALFGLDTITVSEGSGTTLFILNTA
TGNGGAVYGDKAVSFNNITSLKFQSNSADKQGGAIYSKGNLTIQDSSLLTMFNGNNGKTG
GGAIYSLGDITLSNLSQVSFGANKAGNYDITITVKNDEGTNAIVPSVQSKISSALLASPP
ANLSASASAVDPAPNPPLGKGGGIYVGNNLSISNITSTLEFVKNQSTDSGGGVYVKGTLT
CQDSHRLQFVSNSSKKSGGGLYSETDVTFTNLTGNTLFQGNTAEEDGGGICLANEKSLNM
SNLESFCLIGNTSTKKNGGGANIPKALSLTFSAPNSSPDAILSETPAVIPVFGSAIISGN
KAVEGNGGGIYTKKASFTNLELIDINQNSAKNGAGLCTQNISSSAASASGVGGLGGVGGF
IKTSTGISSQKSEVAAVVSGAPAATPDDLDFKVDYVVTTNITKNAATENGGGVYGNKGQI
SRLDLLNITENSSGKCGGGLYFQETLTLEGIEVSNISNNTAKESGGALYAKTLTCKTFTD
GLTVSNNKAETTSTVSGTNVVNASAAATNGALQAATLTEKFSTDNKAEAHASVAPAAQQA
SVPTAITGGALYAETLTLEGLQSTCAFSGNQAIDNNATDSTADTPADPDIQGGAIYAKTK
FTLQNCSGNLTFKDNSVLTKRSQTTGQLAGGAIYAPTVEIKNCSQAINFSNNSASCTPKT
AGASEKAGAGITPKESFGGAIAGTTSITFTGNQAIFFQNNSADIGSAIGCKNGNNNNGTV
TFSDSGYYLFEGNTAKNRGTIYATTLSIPNGYLNFSNNSSANDGSAIYFTKQADITAGSS
VLFLNNKVTLAQTPTSKNGKSAVNNLGAAIYGEPTSSSDDANLNLTALGGSITFKNNGCT
APTRQDNQVKSFCSIAGKVKLTLNAAENHSINFYDAVNITTQKTSDYNPLDINKPSNGKT
SQQYTGTVLFSGELHEHKSFIPQKATLHAGTLVLGKNAELSLISFEQKPGSLLVMGPGSV
LSTHKPTASGSAASGGIVINNITIDFSEIVSDNGVASPPTLKLGATPTPIAAGPGAHRSK
QSALPQANKQAPDVDQEKIYLTGTLTLIDPSGVFYQNPYLGQDREIELLALPQDSSKVDI
SDLTLAGDTKPLKGYIGTWELQSTDQNGKLQAKWKFEEYRRWIYIPRDNYFYVNSILGSQ
NSLIAVKQGVVNNMLNNARFDDAAYNNLWLSGIGSFLQKSQGEESREFTYHGRGYSLAID
AKPRPELILGAAFSQVFGHAKSEKTVDNYKHKGSDHSFQGTLYAGRAFYLPYKRTKAPRP
ILLQGVVTYGYMKHDTTTYYPSIQERNLGNWEDLGWMFDVRMIMDLKEPSQNSTTRFSFY
SEAEYTGVRQKQFTELDYDPRTFDSFAYRNLAIPLGFVMEGALMQYDILMYNKLSLAYVP
VIYRNKPKCSYRVDSTGQTGEVYGVIPTRNAARAEYSTQLYLGPYWTLYGTYTVEAGMSS
LVQIANCGARMIF
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctatcagctacagctgtttttgctgccgtgctcccctcgattacagtattt
tgtgaccccctttcgaaagaattaaactctaactacagaggatcgggttcaagtactgcg
gatgctcgtttgaccaattttactcagcaaacgcaagatgcaagcggaataacctatctt
gtttccggggatgtttccttctcaaacttcactaacatcccagatcccaaacctcagcca
ccatccacagaaccagaaacttctcctgaaacaaaagatagcgctgctaaaagcagcgaa
agcagcaatccagcaagcataacccaaaacattgcgcatcttcaaacacagctttatcaa
tcgcttttccagagtctcggctcttcctcatttgcaccgcatttttcagatcgtgatcaa
ggaaacttagatcttagcaattatctattttcaaatatccactctctaagctttccgttc
accgcatcagcaggatccactacgacaaccacaacgactcctgaagatcctaaaggcgga
ggagctttttacaacgataaagacggtcctttatcattcactacctatgcgggcaatccc
ggatctctctcttgttctctcattaaaatgaagggaaaaggtggggctatctattctaaa
ggcccgatatcttttgatggactagagaatcttacatttaaagacaatctatcccagcaa
tctggtggtgctttatttaccgactctacattgaccattagaaatatcctgaactctatt
gaatttacaacaaatgcagctagagtccctattcctcttattcctattcaaccagcccca
acaaatcctcctgcagggtcagctgtaacaggaacacttttagcatcagatagctccgag
aaaaaagccgcaaatacctctccaacccttcctgtttacactacagagacagcaggaaac
ggtggagctgcgtttgccacaggcgctatgctcattaccacctacaaagacatgaccttc
agaaggaactctgctgagttccccgcaataattgatacaatccaagcaacgatcgatgct
aataaaaataaagtagtatccgcagtccccaaatcttcccaaattatctctgcggctcaa
ccatcacagggatcaacaactccagaggtgattaagggatcaggaggtgcactgtttggt
ttagataccattacagtcagtgagggatccggaacaaccctgttcatcttgaatacagct
acaggaaacggtggagctgtctacggggacaaagcagtatctttcaataacattactagt
ttaaaattccaaagcaactctgcagataaacaaggaggcgctatttattccaaagggaat
cttacaatacaagattcctctctccttaccatgtttaacggaaacaacggtaaaactggc
ggaggtgctatttatagccttggagacataaccctttccaacctatctcaagtaagtttt
ggagctaataaggccggaaattacgatattaccataacggttaaaaacgatgagggaacg
aatgcaattgttccctctgtgcagtccaaaatttcctctgctctactagcatctccccct
gctaatctcagcgctagcgcgtctgcagtagatccggcacccaacccaccactagggaaa
ggtgggggtatttatgtaggcaacaatctgagtatctccaacatcacgtccactctagaa
ttcgtaaaaaaccaatccacagattctggtggaggtgtctacgttaaagggacattaaca
tgccaagattcccatagattacaatttgtttccaatagttcaaaaaaatctggtggtggt
ctgtatagtgaaaccgatgttacatttacaaaccttacagggaacactctctttcaagga
aatactgccgaagaagacggcgggggtatctgtttagccaatgaaaagtctctcaatatg
tccaatttagagagcttttgtttaataggtaatacctccactaaaaaaaatggtggcggt
gcaaatattcccaaagccttatcccttactttctctgcccccaactcctctcccgacgca
attctttctgaaacacctgctgttattcctgtatttggaagtgctattatttctggaaac
aaagctgtagagggtaacggtggaggcatttacacgaaaaaagcatctttcactaatctt
gaattgatcgacatcaatcagaactctgctaaaaatggtgctgggctttgtacgcaaaac
atatcctcctccgctgctagtgcttctggagttggaggcttaggaggtgttggaggcttc
atcaaaacctcaaccggaatttcttctcagaaatctgaagtagctgcagtagtttccgga
gcccctgcagcgactccagacgatttagacttcaaagttgactatgttgttacaacaaac
attactaaaaacgctgcgacagaaaacggtggtggtgtttacggaaataaaggacagatt
tctcgtcttgatcttctaaatatcacagaaaactcctctggaaaatgcggtggaggccta
tattttcaagaaacattgacccttgaaggcatagaagtctccaatatttcgaataacaca
gccaaagaatctggtggagctctctatgcaaaaactcttacctgcaaaacttttaccgac
gggcttactgtaagtaataataaagctgagacaacttcaaccgtatcgggaactaatgtt
gttaacgcctctgcagcagcgactaatggcgctctccaagctgcaactcttactgaaaag
ttttctacggataacaaagctgaggcccatgcctctgtagcgccggcagcccaacaagct
agtgtccccacagcaattactggtggagctctctatgcagaaacactcaccctagaaggc
ctacaaagtacttgtgcattttctgggaaccaagctatcgacaacaatgccactgactca
actgccgatacacccgcagatcctgatattcaaggtggagctatttatgctaagactaaa
ttcaccttacaaaactgctccgggaacttaaccttcaaagataactctgtactcacgaaa
agatctcaaaccacagggcaactagctggcggagctatttatgctcctactgttgaaata
aaaaattgctcccaggctatcaatttttctaataactccgcctcatgcaccccaaaaaca
gcaggagcctctgaaaaagcgggtgcaggaattacacctaaagaaagttttggtggagct
attgcaggaacgactagcattacatttacaggaaaccaagctatctttttccaaaataac
tccgcagatattgggtctgcaattggctgcaaaaatggtaataacaataacggtacagtg
acattttctgattccggttactacttatttgaagggaatacagcgaaaaaccgcggaacc
atttatgcaaccacgttatctattcccaacggatacctaaacttctctaacaatagttct
gctaacgatggtagtgctatttactttacaaaacaggccgatatcacagcaggatcatcc
gtactgttcctaaacaacaaagttaccctagcacaaactcccacttctaaaaatggaaaa
tctgcagttaacaacctaggagccgcaatctacggagaaccgactagcagtagcgatgat
gctaatcttaaccttacagccttaggtggcagtatcacattcaaaaataacggatgcaca
gcaccaaccagacaagacaaccaagtaaaatctttctgtagtatagctggtaaagttaaa
ctcactcttaatgctgcggaaaatcactctatcaacttttacgatgccgtaaacatcaca
acccaaaaaactagtgattataaccctctagatatcaataaacccagcaatgggaaaacc
tctcaacagtatacaggaactgtattattctctggagaacttcacgagcataagtctttc
attccacaaaaagctaccctacatgctgggactttagtcttagggaaaaatgcagagtta
agtcttatttcctttgagcaaaaacccggatctctgcttgttatggggccaggctcagta
ttgtctacgcacaaaccaacagcgtcaggatctgccgcaagtggaggtattgtaattaac
aacatcactattgattttagtgagattgtttcagacaacggagtcgcttcccctccaact
ttaaaattaggagccaccccaactccaatagcagcaggacctggggctcatagaagcaaa
caaagtgcgcttccacaagcaaataaacaagctccagacgtagaccaagaaaaaatctac
ctaacagggacgcttacccttatcgatccttcaggcgtcttttaccaaaatccttactta
ggccaagaccgcgaaatcgagttactcgctctaccacaggattctagtaaagtagacatt
tccgatcttactctagcaggagatacaaaacctctgaaaggttacattggaacttgggaa
ctccaatcaacagatcaaaatggtaagctccaagctaaatggaagtttgaggaataccgt
cgatggatttatattcctcgtgataattacttctatgttaactctatcctaggttctcag
aactctctgattgctgtgaagcagggtgttgtcaacaacatgcttaacaacgcacgtttt
gatgatgctgcttacaataacctttggttatccggaattggatcgttcttacaaaaaagc
caaggagaagaatctagagaattcacctaccacggtcgagggtactctcttgctatagat
gctaaaccccgtcctgaacttattcttggagctgcatttagccaagtattcggacatgca
aaatcggaaaaaaccgtagacaactacaaacataagggttccgatcactccttccaagga
actttatatgccggtagagccttctatttgccttataagcgcacgaaagctcctcgcccc
atccttcttcagggggtagtgacttacggctatatgaagcatgatacaaccacctactac
ccatccattcaagagcgcaatcttggaaattgggaagatctgggttggatgtttgatgtg
cgtatgattatggatttaaaggagccttctcaaaactccacaacacgattctccttctat
tcagaagcagaatatacaggagtgcgtcaaaagcaattcacagagcttgactacgatcct
agaacctttgattcctttgcctatagaaatcttgccattcctttaggattcgtcatggag
ggtgcgctaatgcaatacgatattcttatgtataataagctatccctcgcttacgtacct
gtgatctacagaaacaagcctaaatgtagctatagagttgactctacaggacaaactggt
gaagtttatggtgtaattcctacaagaaatgcagcaagagcagagtacagtacacagcta
tacctagggccatactggacgctatacggcacctatactgtggaggcaggaatgtcttca
ttggtgcagatagccaactgtggcgcacgtatgatattctaa
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