Chlamydia felis Fe/C-56: CF0876
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Entry
CF0876 CDS
T00332
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cfe
Chlamydia felis Fe/C-56
Pathway
cfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CF0876 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfe03021
]
CF0876 (rho)
03019 Messenger RNA biogenesis [BR:
cfe03019
]
CF0876 (rho)
Transcription machinery [BR:
cfe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CF0876 (rho)
Messenger RNA biogenesis [BR:
cfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CF0876 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
AAA
DUF5855
Mor
NACHT
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BAE81648
UniProt:
Q252Z0
LinkDB
All DBs
Position
complement(1027707..1029101)
Genome browser
AA seq
464 aa
AA seq
DB search
MKEERSSEVLPKVKENKKHTCPVLQEKSFAGECAVVAEAVDENQPVTITKIAKLQRMGIE
ELNILARQYGVKNIGSLTKSQVVFEIVKAKSERSDELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNERIVMEMGKEHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELEKVYLFRQAIADLTAIDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaacgttcttcagaagtcttgccaaaggtgaaagagaataaaaaacatacg
tgtcctgtgttgcaagagaaatcttttgcaggagaatgtgcagtagttgcagaggctgtt
gatgaaaatcaacctgtaactattaccaaaattgccaaattgcaaaggatgggaattgaa
gagcttaacatattggctcgtcaatatggagtgaagaacattgggtctcttactaaatct
caagtggtctttgagattgttaaagcaaaatcggagcgttccgatgagcttctaattgga
gaaggggtcttagaagtgcttcccgacgggtttggttttttaagatctcctacttataac
tacctcccctcagctgaagatatttatgtttctcccgctcagatccgcagatttgatttg
aaaaagggagacacaattatagggactatacgttctccaaaagagaaggaaaagtatttt
gccttattaaaagtagataaaattaatggatctaccccagataaagccaaggaacgagtt
ttatttgaaaacttaactcctctctatcctaatgaaagaattgttatggaaatggggaaa
gagcaccttgcagaaagggtattggatcttacggctcccattgggaaaggtcaaagagga
cttattgtcgctcctccacgttctggaaagactgtaatcttacaaagcatagcgcatgct
attgccgttaataatccagatattgttttaatcgttctgctcatcgacgaacgacctgaa
gaagttacagacatgattcgtcaggtgcgtggtgaagttgtggcttctacatttgatgaa
caacccgaaagacacattcaagttgcggaaatggttatagaaaaggctcgacgtctagtt
gaacacggaaaggatgttgtgattcttctcgattctattacacgcttagctcgagcttac
aataccgtacaaccgcattcaggaaaaattttaacaggtggtgtggacgccagcgctcta
cataaaccaaagagattcttcggagccgccagaaatattgagggtgggggatcattaacc
attttagctacagcgctgattgatacgggctctagaatggacgaagtgatttttgaagaa
ttcaaaggtacaggaaacatggaacttgtgctggatcgtcgtctttctgatcgaagaact
tatcctgctattgatctcattaagagcggcacaagaaaagaagagctactttatcatcct
agtgaattagaaaaggtgtatctcttccgtcaggcgatagccgatcttaccgctatagat
gctatgcatttgttattgggtagattaaaaaagacaaatagcaatgcagaatttttgctt
tctttaaaagaataa
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