KEGG   Ctenocephalides felis (cat flea): 113363424
Entry
113363424         CDS       T08578                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cfel  Ctenocephalides felis (cat flea)
Pathway
cfel03020  RNA polymerase
cfel03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113363424
  09124 Replication and repair
   03420 Nucleotide excision repair
    113363424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfel03021]
    113363424
   03400 DNA repair and recombination proteins [BR:cfel03400]
    113363424
Transcription machinery [BR:cfel03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113363424
  RNA polymerase III system
   RNA polymerase III
     113363424
  RNA polymerase I system
   RNA polymerase I
     113363424
DNA repair and recombination proteins [BR:cfel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113363424
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 113363424
NCBI-ProteinID: XP_026461714
LinkDB
Position
Unknown
AA seq 210 aa
MDDDAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLDQFKQQFGDKPSEKHPARSDLIV
LVAHNDDPTDQMFVFFPDEPKIGIKTIKTYCTRMQDENIHRAIVVVQIGMTPSAKQSLVD
MAPKYILEQFLESELLINITEHELVPEHVVMTPEEKQELLARYKLKENMLMRIQVGDPVS
RYFGLKRGQVVKIIRSSETAGRYISYRLVC
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgatgctgagacttacaaattatggagaattagaaaaactgttatgcaactt
tgtcacgatcgaggatatttagtaacacaagatgaattggatcaaactttggatcagttc
aaacaacaatttggcgataaacccagtgaaaaacatccagcgaggtctgatcttattgtt
ttagttgctcataatgatgatcctacagatcagatgttcgttttctttcccgatgaaccc
aaaataggaataaaaaccataaaaacatactgtacaagaatgcaagatgaaaatattcac
agagcaattgtagtggttcagatcggtatgacaccttcagctaaacaatcactagttgat
atggctcctaagtacatattagagcagtttttagagtctgagttactaattaatataacg
gaacatgaacttgtaccagagcatgttgtcatgacaccagaggaaaaacaggaattgctt
gcaagatacaaattgaaagaaaatatgttgatgagaattcaagtcggagatccagtctca
agatattttggtttaaaaagaggacaggttgtgaaaatcatacgatcatccgaaactgct
ggaagatatatctcatatcgtttagtgtgctaa

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