Ctenocephalides felis (cat flea): 113365752
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Entry
113365752 CDS
T08578
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113365752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113365752
03041 Spliceosome [BR:
cfel03041
]
113365752
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113365752
Spliceosome [BR:
cfel03041
]
Complex B
Other components
Prp19-related factors
113365752
Complex C
113365752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_8
TPR_15
TPR_10
TPR_12
Mad3_BUB1_I
ARM_TT21
PPR
DHR-2_Lobe_A
NRDE-2
SPOUT_MTase_2
Motif
Other DBs
NCBI-GeneID:
113365752
NCBI-ProteinID:
XP_026463070
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MTVSSKMGDINISFQEDDIAYEEEILRNAFSVKHWLRYIEHKKKAPKHIINIIYERALKE
LPGSYKIWHQYLKLRRKQLKGLCITDPQFEEVNNVFERALVFMHKMPRIWMNYCSFMTDQ
CLITRTRQVFDRALRALPITQHHRIWPLYITFIKKHDIHETAIRVFRRYLKLCPEEAEEY
IEYLVSIDWLDEAAIQLAKIVDSDTFVSKHGKSNHQLWNELCELISKNPHKVHSLNVDAI
IRGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE
ELSLSKCMEEASKNQNPTEDDDIDLELRLARFEHLMERRLLLLNSVLLRQNPHNVPEWHK
RVKLYEGKPHEIINTYTEAVQTVQPKLAVGKLFTLWVEFAKFYEKNGQIDDSRLVFEKAI
LVPYVKVDELASVWCEWAEMEIRHENYEDALKLMHRATAMPSRKVAYHDDTEPVQMRLYK
SLKIWSMYADLEESFGTFKSCKAVYDRIIDLKICTPQIIMNYGLFLEEQNYFEEAFRAYE
KGIAQFKWPNVYDIWNTYLSKFLNRYGGTKLERARDLFEQCLEKCPPQFAKSLFLLYAKL
EEEHGLARHAMAVYERATVAVLPEEMFQMFNIYIKKAAEIYGVPKTRQIYEKAIELLPED
KAREMCQRFAEMETKLGEIDRARAIYSHCSQMCDPRITADFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQVNMMSAQMLSSANLSAGTVADLAPGARDNMRMLEAKAAAEIQSGN
AGFAKPSNIMFVRGETQGQPNRDDKISKVINPDEIELDMDEDDEDKEENSDTEQKEGYEE
TAEYKDAPVQKQIVPDKVFGSLLTKQDD
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgactgtatccagtaaaatgggtgatattaatatatcattccaagaagatgacattgcg
tacgaagaagaaattttacgcaatgctttttctgtaaaacattggttacggtatattgag
cacaaaaagaaagcacctaagcacataatcaacataatttatgaaagggctttgaaagaa
ctgccaggttcatataaaatttggcatcaatacttaaaacttcgccgaaaacaattgaaa
ggtctatgtataacagatcctcagtttgaagaagtcaataatgtatttgaacgtgccttg
gttttcatgcacaaaatgccgaggatatggatgaactattgttctttcatgacagatcag
tgtttaataacaagaactcgacaagtgtttgatcgggctctgagagcattgccaattact
caacatcatagaatttggcccttatacattacatttataaagaaacatgatattcatgaa
actgctataagagtttttagaagataccttaaattatgccccgaagaagccgaagagtac
atagaatacttggtttctatagattggttagatgaagcagccattcagttagctaaaatt
gttgatagtgatacctttgtttcaaaacatggaaaatctaatcatcaactgtggaatgaa
ctttgtgaattaatatctaaaaatccacataaagtacattcactaaatgttgatgctatc
atacgaggtggtcttagaaggtatactgatcagttaggacatttatggaattccttagca
gattattatgtgcgtagtgggttatttgaacgcgctcgagatatttatgaagaagcaatt
caaacagttactactgttagagattttacacaagtttttgatgcatatgctcagtttgaa
gaacttagtttaagtaagtgtatggaagaagcttctaaaaatcaaaaccccactgaagat
gatgatattgatcttgaattgagacttgcccgatttgaacatttaatggaacgaaggtta
ctgctactgaattctgtacttttacgccaaaatcctcataacgtacctgaatggcataaa
agggtaaaactgtatgaaggcaagcctcatgaaattataaacacatatacagaagcagtt
caaactgttcaaccaaaattagctgttggtaaattgtttacattatgggtagaatttgct
aaattttatgaaaaaaatggacagattgatgattcaagactagtgtttgaaaaggctatt
ttagttccatatgttaaagtagatgaactagcatcagtttggtgcgagtgggcagaaatg
gaaattcgtcatgagaattatgaagatgctttaaaactaatgcacagagctacagcaatg
ccatcaaggaaagtagcatatcatgatgataccgaaccagttcaaatgcgtttatacaaa
tctttaaaaatatggtcaatgtatgcagatctagaagaaagctttggaacatttaaatct
tgtaaagctgtatatgatagaattatagatttaaaaatatgcactccacaaattattatg
aattatggactatttttggaggaacaaaattattttgaagaagcgtttagagcttatgaa
aagggtattgcacaattcaaatggccaaatgtttatgatatttggaatacttatttatca
aaatttttaaatcgttatggtggtacaaagttggaaagagcaagagacttatttgaacaa
tgtctagaaaaatgtcctcctcaatttgctaaatcattattcttattatatgctaaatta
gaagaggaacatggattagctcgacatgccatggctgtttatgaacgagctacagttgct
gtactacctgaagaaatgttccaaatgtttaatatatacattaaaaaggctgcagaaatt
tatggtgttcccaaaacgagacaaatatatgaaaaagcaattgaactattaccagaagat
aaagcaagagaaatgtgccaacgctttgctgaaatggaaaccaaattaggtgaaattgac
agggctcgagcaatatattctcactgtagtcaaatgtgtgatcctagaatcactgctgat
ttttggcaaacttggaaagaatttgaaataagacatggcaatgaagatactatgagagaa
atgttgaggattaaacggagtatacaagctacttataatactcaagttaatatgatgtct
gctcaaatgttaagttcagcaaacttatctgctggtacagttgctgatttggctcctggt
gcaagagataatatgagaatgttagaagcaaaagctgcagctgaaatacaatcaggaaat
gctggttttgctaagccttcaaatattatgtttgttcggggagaaacacaaggacagcca
aatagggatgacaaaatatctaaagttattaatcctgatgaaattgaattagatatggat
gaagatgatgaagacaaggaagagaattcagacacggaacagaaagaaggatatgaagaa
actgctgaatataaggatgctccagttcaaaagcaaatagtaccagataaagtgtttggt
agtctattaacaaaacaggatgattaa
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