Ctenocephalides felis (cat flea): 113366285
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Entry
113366285 CDS
T08578
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113366285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfel03041
]
113366285
03009 Ribosome biogenesis [BR:
cfel03009
]
113366285
Enzymes [BR:
cfel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113366285
Spliceosome [BR:
cfel03041
]
Complex A
U1 snRNP components
U1 related factors
113366285
Complex B
113366285
Ribosome biogenesis [BR:
cfel03009
]
Eukaryotic type
Pre-60S particles
Helicases
113366285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
113366285
NCBI-ProteinID:
XP_026463651
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MFAVIKSLTKLRLDFRQVRLIGKSITQPSTFISTSIRHLQQFDMTYGNENGYGGKSSSYG
NRSNGFNSSRGNRSGGYGNSSSNGYGNRNGGFSRGSKDSFGGSKMTKPNWSSEFLKPFKK
DFYCPHPNVANRSYREVEEYRNAKEITVHGDAPNPIQYFEEANFPDYVMQGIKKQGYTEP
TAIQAQGWPIAMSGKNMVGIAQTGSGKTLGYILPAIVHINNQPSISRGDGPIALVLAPTR
ELAQQIQQVATEFGSLSYVRNTCVFGGAPKGSQARDLERGVEIVIATPGRLIDFLESGRT
NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTCMWSATWPKEVRKLAEDYLGDY
VQINIGSLQLSANHNILQIVDVCQEHEKETKLSNLLQEIGNTQEEGAKTIIFVETKKKVE
NITRNIRRYGWPAVCMHGDKSQQERDYVLREFRSGKSSILVATDVAARGLEAHAR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggtaatcaaaagtttaacaaaacttcggcttgatttcagacaagtgcggcta
attggaaaatcaataactcaaccatctacttttatttctacatcgatcaggcatcttcaa
caatttgacatgacttacggaaacgagaacggttatggtggaaaaagcagcagctacggc
aatcgctctaatggatttaactcgagtcgaggcaatcgtagtggtggatacggcaatagc
tccagtaatggttacggaaatcggaatggaggatttagccgcggttcgaaagatagtttc
ggtggctcaaaaatgactaaacctaattggagttccgaatttttgaaacctttcaagaag
gacttctattgccctcatccgaatgtcgccaaccgctcttatcgcgaagttgaagagtac
cgcaatgctaaagaaatcacagttcatggagatgctcctaatccaatccagtactttgaa
gaagccaactttcctgattatgtgatgcaaggaataaaaaaacaaggatacacagaaccc
acggctattcaagcacaaggatggcctattgcaatgagtggaaaaaatatggttggcatt
gctcaaacaggttctggcaaaaccttaggttacatactacctgctatagtacacataaat
aatcaaccttccatatccagaggagatggacctattgctttagtcttagctcctaccaga
gaactagcacaacaaattcaacaagtagccacagaatttggaagtctttcctacgtgcgt
aacacctgtgtctttggaggtgcacctaaaggcagtcaagcaagagatttggaacgaggt
gttgaaattgttattgctactccaggaagacttattgattttcttgaaagtgggcgtacc
aatctaaaacgctgcacttatctcgttcttgatgaagctgatcgtatgcttgatatgggt
tttgaacctcaaattcgcaaaatcattgaacaaatccgtcctgacagacagacttgcatg
tggtcagctacttggccaaaagaagtgagaaaactagcggaagattatcttggtgattat
gtacaaattaatataggatctttacagctgtcggccaatcacaatattctacaaattgta
gatgtttgtcaagaacatgaaaaggaaacaaaattgagcaacttattacaagaaattggt
aacacgcaagaagagggagcaaaaactataatttttgtagaaaccaaaaagaaagttgaa
aatattacacgcaatattcgtagatatggatggcctgcagtctgtatgcatggtgacaag
tcacagcaagagagagattatgtattaagagaatttagaagtggaaaaagttcgatttta
gttgcaactgatgtagctgctcgtggacttgaggcacatgcgagataa
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