Ctenocephalides felis (cat flea): 113366565
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Entry
113366565 CDS
T08578
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113366565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfel03041
]
113366565
03009 Ribosome biogenesis [BR:
cfel03009
]
113366565
Enzymes [BR:
cfel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113366565
Spliceosome [BR:
cfel03041
]
Complex A
U1 snRNP components
U1 related factors
113366565
Complex B
113366565
Ribosome biogenesis [BR:
cfel03009
]
Eukaryotic type
Pre-60S particles
Helicases
113366565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
113366565
NCBI-ProteinID:
XP_026463977
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MQYNSVYNNQNNHMYRPRPDCNEQYGKQTNCWTPQMPNDFGGPKMDYSNKDFGGPKSYTN
KSQTFMAGLKNDFGGPKLQSMKAKNPGESLKKPDWSQANMQPFRKNFYVPHAKNKDRTKE
EVDRYREEKEITVNGNDVPNPNQEFDEGNFPEYIMREIRKQSFAEPTAIQSQGWPIALSG
RDMVGIAQTGSGKTLAYMLPAAVHISNQERLQRGDGPIALVLAPTRELAQQIQTVARDFG
ASNSIRNTCIFGGSPKGPQARDLERGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEAD
RMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLNDYIQINIGSLNLAANH
NIRQIIEICEESQKEQKLSNLLREIMTERTNKIIIFVETKKKVDDITKTIKREGYAAICI
HGDKSQGERDHVLNEFRCGKSSILVATDVAARGLDVEDVKYVLNYDYPNSSEDYIHRIGR
TGRCDQSGTAYTFFTPGNSRQARELVAVLEEAGQSVPPTLMEMARTSFNGKGSSNQTKSN
FHKRQLPQSQTNNFNSPGRNRWQQNNNRNKDNGAMMMGKPMNNQWINPSHQEYQPMRPGS
GAPRFNNPMGNHMRNPHNGGGMEHNGYQPRNNGYQKSYHNQNMNGAGGYQSNGYQSNGYQ
NNGPRNYGNRGYNPSGGPNPRYNRNQSNGQSNSQFVANGGASVPQGHASPQPAAGMYGML
APAPGVGAHHGHHAYVMGAPGAPGAGSDAGIQSILSNKFFQTGRGAQSNPCAFQSMAPPS
VPYGQFAPVQQAAYYHQYTAAPPTAAVQQ
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacaatagtgtgtataataatcagaacaatcatatgtacagaccacgtcctgac
tgcaacgaacaatacggtaagcagacaaactgctggactccacagatgccaaacgatttt
ggaggtcctaaaatggattacagtaacaaagatttcggtggaccgaaaagttataccaat
aaaagtcagacgtttatggctgggttaaaaaatgattttggtggacccaaactgcagagt
atgaaagcaaaaaatccaggtgaaagtctcaaaaaaccagattggagtcaagccaacatg
cagccgtttaggaagaacttctatgtaccacatgcaaagaataaagacaggaccaaggag
gaagtagacagatacagggaggagaaagaaatcacagttaatggcaatgatgtaccgaat
ccaaatcaagagtttgatgaaggcaatttcccagaatatatcatgagggagattcgaaaa
cagagttttgctgaacccactgcgatacagtcacaagggtggccaattgctttgagtgga
cgggatatggtaggaattgcacaaactggttctggaaagacactggcctacatgctgccc
gccgctgtgcacatcagcaaccaagaacgtcttcagagaggagatggccccattgcattg
gtacttgcccccactcgagaattagctcaacaaattcaaactgttgctcgtgactttggt
gcttcaaattcaattcgcaacacttgtatttttggaggatctcccaaaggacctcaagca
cgcgatttggaaagaggtgttgaaattgtcatagccacacccggtcgactgattgatttc
ttagagcgtggaaccacaaatttaagaaggtgtacttatctggtgcttgatgaagctgat
agaatgttagatatgggttttgaacctcaaattcgtaaaatcattgagcaaatcaggcca
gacagacaagttttgatgtggtctgcaacttggccaaaagaagttcaagctttggcagaa
gacttcctaaatgactacatacaaattaacatcggttcactgaatcttgctgctaatcac
aacatcagacagataattgagatctgtgaagagtctcagaaagaacaaaaattgtccaat
ttgttaagagaaattatgacagaacgtacaaacaagattataatttttgttgaaaccaaa
aagaaagtagatgatataacaaaaacaattaaaagggagggatatgctgcaatttgtatt
catggtgataagtcacaaggcgagcgggatcatgtgttgaatgaattcagatgtggaaag
tcttcaatattggtcgctacagatgttgctgctagaggtttggatgtagaagatgtgaag
tatgttttgaactacgattatcccaattcatctgaggattacatccatagaattggtcgt
acaggtcgttgtgatcaatcaggaactgcttacaccttcttcactcctggtaacagcaga
caagctcgtgagttggtagctgttcttgaagaggcaggacaaagtgtacctccaacactc
atggaaatggcccgcacatcattcaatggaaaaggttcttcaaaccaaacaaaatctaac
tttcacaaaaggcaattgccacaatcgcaaacaaataattttaattcgccagggcgcaac
cgatggcagcagaataataaccgtaacaaggacaatggagccatgatgatgggaaaaccg
atgaacaaccagtggatcaatccaagtcatcaggagtatcaacccatgagaccgggaagt
ggtgcacccaggttcaataatccaatgggaaaccacatgcgcaatccacacaacggagga
ggaatggagcataatggatatcaaccaagaaataatggttatcagaagagctatcacaac
caaaacatgaatggagccggtggttaccagagtaatggttaccaaagcaatggctatcag
aataatggaccaagaaattatggaaatcgtggttataatccatcaggaggaccaaaccca
cgctacaaccgtaaccaatcaaatggccaatcaaattcccaatttgtagccaatggtggt
gcttcagttcctcagggccatgccagtccacagcctgcagcaggcatgtatggtatgcta
gcacccgctcctggcgtcggagctcatcatggacatcatgcttatgttatgggtgctccc
ggagctccaggtgctggaagtgatgcaggaattcagagcatattaagcaacaaattcttc
cagaccggtcgcggtgctcagagcaatccctgtgccttccaatcaatggcacctccatca
gtaccgtacggtcaatttgctcctgtccagcaagcggcctattaccaccagtacacggct
gcccctccaacggccgcagttcaacaataa
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