Ctenocephalides felis (cat flea): 113368454
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Entry
113368454 CDS
T08578
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113368454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfel03041
]
113368454
03009 Ribosome biogenesis [BR:
cfel03009
]
113368454
Enzymes [BR:
cfel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113368454
Spliceosome [BR:
cfel03041
]
Complex A
U1 snRNP components
U1 related factors
113368454
Complex B
113368454
Ribosome biogenesis [BR:
cfel03009
]
Eukaryotic type
Pre-60S particles
Helicases
113368454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
113368454
NCBI-ProteinID:
XP_026465786
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MYNRERNGRGGGSGGHFRGGSGGRSTSVRSTATRFSGARSSTDRGSSGRSSNRGSSRGSM
VRNGAQNRESFKDKQPGDRLRKVRWDSYELQPFRKDFYQPHPSVVSRPAEVTEVFRNKME
ITVKGNNVPSPNIYFEEGNFPDYAMYEIKKQGFEQPTAIQAQGWPIALSGRDMVGIAQTG
SGKTLAYILPAIVHINHQPRLQRNDGPIVLVLAPTRELAQQIQQVANDFGQSVHVRNTCI
FGGAPKGPQARDLERGVEIVIATPGRLIDFLERNTTNLRRCTYLVLDEADRMLDMGFEPQ
IRKIIEQIRPDRQVLMWSATWPKEVRNLAEEFLHNYIQINIGSLNLAANHNILQIVDVCD
EYEKQNKLTRLLTEISSESETKTIIFVETKRKVDEITHAVCRMGWRAMSIHGDKSQQERD
YVLNSFRNGKDGILVATDVAARGLDVEDVKFVINYDYPSNSEDYVHRIGRTGRSQKTGTA
YTLFTVQNAAKANDLIAVLQEANQVVNPRLFDLAKAGSGFGRNRGRFSKSGGMPARRDFG
RSQNNNRNSNTNSQPFTRGGNSRYSNGGGSKEEWNSRGNKSYNNDVSTRSTRNSYDQNTN
NFRVSYTNTSVPPPPLGSFPNRSTNGTYGSSTNGVYSIGNSASKY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtataatcgtgagcgaaatggacgaggaggtggaagtggaggccattttcgtggtggt
tcaggagggcgttcaacttctgtgagatccactgcaactcgtttcagcggtgccagatct
tctaccgatcgtggcagtagtggccgtagtagtaatagaggaagctctagaggtagtatg
gttcgcaatggagctcaaaatagagaatccttcaaagacaagcagcctggtgatagattg
cgcaaagttagatgggacagctatgaactacaaccgttccggaaggatttctatcaacca
catccaagtgttgttagtagacctgcagaagtaacagaagtatttcgtaataaaatggaa
ataactgttaaaggtaacaatgttcccagccccaatatatattttgaagaaggtaacttt
cctgattatgctatgtatgaaataaagaagcaaggatttgaacaaccaacagctattcaa
gctcagggttggccaattgcactcagtggcagagatatggttggtatagcacaaacaggt
tctggtaaaactttggcttatatattacctgccatagttcatattaaccatcagccgcga
cttcaaagaaatgatggaccaattgttctagttttggcacctactagagaattggcacaa
caaatacagcaagtagcaaatgactttggccaatctgtacatgttaggaacacatgtata
tttggtggagcaccaaaaggcccacaagcaagggatcttgagcgaggtgttgagattgtt
attgcaactccaggtcgtttaattgattttcttgaacgaaacactactaatttacgacgt
tgtacttacttagtattagatgaagcagataggatgttagacatgggttttgaacctcaa
ataagaaagataattgaacaaattcgtccagacagacaagtacttatgtggtctgctact
tggccaaaagaagttcgcaatctagctgaagagtttttacataattatattcagattaat
atagggtctttgaatttggctgcaaatcataacatattgcaaattgttgatgtttgtgat
gaatatgaaaaacagaacaaattaacaagattgcttacagaaatttcttccgagtcagaa
actaaaacaatcatttttgtggaaacaaaacgaaaagtggatgaaataactcatgcagtt
tgcagaatgggttggcgggcaatgagtattcatggtgataaaagtcagcaagaaagagat
tatgttctaaactcatttcgaaatggcaaagacggaatcttagtagccacagatgtggct
gctcgtggtttagatgtcgaagatgttaaatttgtgataaactatgattacccatctaat
tctgaggattatgtgcatcggattggcagaacaggccgttcacagaaaaccggaacagcc
tacacactattcacagtacaaaatgcagctaaagctaatgatttaattgctgtgttacaa
gaagcaaatcaggttgtcaacccccgattatttgacctagcaaaagctggaagtggtttt
ggaagaaatagaggtcgattttcaaaatctggtggtatgcctgcaagaagagattttgga
cgctcacaaaataataatcgtaattccaatacaaattcacagccatttacgcgtggtggg
aattctcgatattcaaatgggggaggttctaaagaagaatggaatagtagaggaaataaa
agctataataatgatgtatctacaagatccaccaggaattcatatgatcaaaatactaat
aattttcgagtatcatacacaaacacaagcgtacctccccctcctttaggaagttttcca
aaccgatctacaaatggcacttatggaagttcaacaaatggagtatacagcattggaaat
tccgcatcaaaatattaa
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