Ctenocephalides felis (cat flea): 113369925
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Entry
113369925 CDS
T08578
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cfel
Ctenocephalides felis (cat flea)
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfel03041
]
113369925
03016 Transfer RNA biogenesis [BR:
cfel03016
]
113369925
Enzymes [BR:
cfel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113369925
Spliceosome [BR:
cfel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113369925
Transfer RNA biogenesis [BR:
cfel03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
113369925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Band_7_1
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
113369925
NCBI-ProteinID:
XP_026466332
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MTAFEEFGVLPEIGKAVEEMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
IQIVYETLKDISEGKGNKMVNQSSPHCLLSFFDRGDALAVTPDGLRCQSREFKEWHGGRA
TKGVFGPGVYCYEASVADEGLCRIGWSTQQATLDLGTDKFSFGFGGTGKKSNSKQFDNYG
ESFGMHDVIGSLIDFDKGEIRFYKNGKDLGTAFVLPKNLKSESFFPSVVLKNAEMSFNFG
ATPFKYSFPQGAIPIANAKNTKTNCVGQTSVSSGDNSTRIPDAPKAIIVEPSRELAEQTF
NQIIKFKKYLGAPEVRELLVIGGVSVKDQMFVLQKGVDIVVGTPGRLEDLIQGGYLALTH
CRFFVLDEADGLLKQGYTELIERLHKQIPKITSDGRRLQMIVCSATLHAFEVKKMAEKLM
HFPTWVDLKGEDAVPETVHHVVVMVDPQSDKSWHSMGRHIQTDGVHSKDNVRPGNNTAET
LSEAVKILKGEYCVRAIKEHKMDRAIIFCRTKIDCDNLENYLKQINSREFSCVCLHGDRK
PQERKSNLEKFKQQLVKFLICTDVAARGLDITGLPFMINITLPDEKSNYVHRIGRVGRAE
RMGLAISLVSSVPEKVWYHGSWCSSRGRNCYNTNLTENRGCCMWYNEPQYLAEIEEHLNV
TIQQVEKDMKIPCNEFDGKVTYGEKKLNMGTGYKDHVGQMAPIVKQLGILESKAQLLYLK
HMSDGERKK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtttgaagagttcggtgttctacctgaaatcggaaaagcggttgaagaaatg
gagtggacgctgcctactgatgtgcaagctgaagctattcctctaatattgggcggtggt
gatgtgcttatggcagctgaaacgggtagtggtaaaactggggcattttgtttaccaata
atacaaattgtgtatgaaaccttgaaggacatatcagaaggaaagggaaataaaatggtg
aatcaaagctcaccacactgcctgctaagtttctttgatcgtggtgatgccttggctgtt
actcctgatggtttacggtgccaatctcgagaatttaaagaatggcatggtggtagagct
acaaagggagtttttggacctggtgtttattgttacgaagcttctgtagctgacgagggt
ctttgccgaataggctggtctacacagcaagccactttagatttaggcactgataaattt
agctttggctttggaggcactggcaaaaaatctaattcaaagcagtttgataattatggt
gaatcttttggaatgcatgatgtcattggatcactaattgattttgataaaggcgaaatt
agattttataaaaatggtaaagatttaggaacagcttttgttcttccaaagaatttaaaa
agtgaatccttttttccatcagtcgtactaaagaatgctgaaatgtcatttaattttggg
gctactcctttcaaatacagttttccacaaggtgctattccgatagcgaatgctaaaaat
actaaaaccaattgcgtaggtcaaacatcagtttcatcgggtgataactcaactagaata
cctgatgctcctaaagcaattattgtggagccttccagagaattagctgagcagacattt
aatcaaataatcaagtttaaaaaatatctaggagctcctgaagttcgagaacttcttgtc
attggaggtgtaagtgttaaagatcaaatgtttgttttgcaaaaaggtgttgatattgta
gtcggcacacctggtcgtttagaagatctcattcaaggaggatatttagctttaactcat
tgccgattttttgtattagatgaggcagatggtttattgaagcagggatatactgaatta
atagaaagattacataagcaaatacctaaaataacatcagatggcagacgtttgcaaatg
atagtttgcagtgcaacacttcatgcatttgaagttaaaaaaatggcagaaaagctcatg
cattttcctacatgggtcgatttaaaaggtgaggatgcagttcctgaaactgttcatcat
gttgttgtgatggttgatcctcagagtgataaaagttggcactcaatgggcagacatata
caaactgatggtgttcactctaaagataatgttcgccctggtaacaacactgctgaaaca
ctttctgaagctgtaaaaatattaaaaggggaatattgtgttcgtgctataaaggaacat
aaaatggatagagctattattttttgtcgtaccaagatagattgtgataatctagaaaat
tatcttaagcaaataaattctagagaattttcttgtgtgtgtttgcatggtgatcgcaaa
cctcaagagcgcaaaagcaaccttgaaaagtttaaacagcagttagttaagtttttaata
tgcacagacgttgctgcaagaggacttgatattactggattgccatttatgattaatata
acattgcctgatgaaaagtcaaattatgtgcatagaattggacgtgttggaagagctgag
cgtatgggtttagctataagtttagtgtcaagtgttcctgaaaaagtatggtaccacggg
agctggtgctcatccagaggcagaaactgttataatactaacttaactgaaaatagggga
tgctgcatgtggtacaatgagccacagtatcttgctgaaattgaagaacatcttaatgtg
acaatacagcaagtagagaaagatatgaaaattccttgtaatgaatttgatggaaaagtt
acatatggagagaagaagttaaatatgggtactggttacaaagatcacgtgggtcaaatg
gcacctatagtgaagcaacttggaatacttgaaagtaaagcgcaattgctttatttaaaa
cacatgtcagatggagaaaggaaaaaatag
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