Ctenocephalides felis (cat flea): 113372176
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Entry
113372176 CDS
T08578
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03013
Nucleocytoplasmic transport
cfel03015
mRNA surveillance pathway
cfel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113372176
09122 Translation
03013 Nucleocytoplasmic transport
113372176
03015 mRNA surveillance pathway
113372176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113372176
03041 Spliceosome [BR:
cfel03041
]
113372176
Enzymes [BR:
cfel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113372176
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113372176
Spliceosome [BR:
cfel03041
]
Complex C
Other components
EJC/TREX
113372176
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113372176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113372176
NCBI-ProteinID:
XP_026468288
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQLPVETTTDTAQRPNVKGTYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQIEPTENQCCVLVMCHT
RELAFQISKEYERFSKYMPAIKVGVFFGGFNISKDEDVLKAGQPHIVVGTPGRVLALVRN
KKLSLKHLKHFILDECDKMLEHLDMRRDVQEIFRNTPHSKQVMMFSATLGKDVRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYLKLKENEKNRKLFELLDVLEFNQVVIFVKSVQRCMA
LAQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFHKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFVSDESDARILNEVQDRFDVNITELPEEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatgatgatcttttggattacgaagatgaagaacagactgagcaattaccg
gtagagacaactactgatactgcacaaagacccaatgtgaaaggcacatatgtgtctatt
cacagttctggttttcgggacttccttctgaagcctgagattttacgtgctattgttgac
tgtggctttgagcatccatctgaagttcaacatgaatgcatccctcaggctgtattgggt
atggatattctgtgccaggcgaaatctggtatgggaaaaactgcagtctttgtcttggct
acattgcagcaaatagaacccactgaaaatcagtgttgtgttcttgtaatgtgtcatact
cgggaactagcttttcaaatctccaaggaatatgagagattttcaaagtacatgccagca
attaaggttggggtattctttgggggattcaatatttccaaagatgaggatgttttaaag
gctggtcaacctcatattgttgttggaactcctgggcgggtgttagctttggttcgcaac
aagaagctgagcctcaagcatttgaaacatttcattcttgatgaatgtgataaaatgtta
gaacatttagatatgagaagagatgtgcaagaaatattcagaaatactccccatagtaag
caagttatgatgttctccgctacattagggaaggatgtgagaccagtttgcaaaaagttt
atgcaagatcctatggaagtctatgttgatgatgaagctaagttgacacttcatggcctt
caacaacattacttgaagctaaaagaaaatgaaaagaacaggaaattatttgagttactt
gatgttcttgagtttaaccaggttgttatatttgtcaagtcagtgcagcgttgcatggcc
ttagcccaattattaacagagcaaaattttcctgccattggaattcatcgagggatgaca
caagaagaaaggttatctagatatcaacaatttaaagattttcataagcgaattttggtg
gccacaaatctctttggtcgtggtatggatattgaaagagtgaatatagtatttaactat
gatatgcctgaagattcagatacttacttgcacagagttgcaagagcaggaagatttggt
accaaaggcttggcaatcacatttgtatcagatgaatcagatgctagaatattaaatgaa
gttcaagatcgatttgatgtcaacattactgaattgccagaagaaatagacttatcttct
tatattgaaggacgataa
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