Ctenocephalides felis (cat flea): 113373731
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Entry
113373731 CDS
T08578
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cfel
Ctenocephalides felis (cat flea)
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfel03021
]
113373731
03036 Chromosome and associated proteins [BR:
cfel03036
]
113373731
Transcription machinery [BR:
cfel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
113373731
Chromosome and associated proteins [BR:
cfel03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
113373731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
Tex_central_region
Spt6_S1
SH2
HHH_9
S1_RRP5
OB_RRP5_4th
Tex_YqgF
HTH_10
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
113373731
NCBI-ProteinID:
XP_026469794
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MDFLDSEAEESEQEDELDNNERKKLKKLKAMDSDEEDEEDDEERLREELKDLIDDAPIEE
DSEGEDSDASAGSKKRKKSDDDDELDDRLEDEDYDLIEENLGVKVERKRFKRLKRIQNEE
SGSEDEEHDPNVDREQIADQLFVGGSDEEEERHSERSHRVVEPEHYDSEASEGEYSDADD
FIVDDDGRPITEKKKKRRHIFTDASLQEGQDIFGVDFDYEEFEKMDEDEYEDEEEDEDYD
DTETGERVRRPKKTPKKKPAKSIFEIYEPSELKRGHFTDFDNEIRNTDIPERMQLREVPI
TSVPEGSNELEEEAEWIYKQAFCKPYISTQDSMSSDHRDRPRKPPSTIAKIKQALDFLRN
QLLEVPFIAFYRKEYVQPELNINDLWKVYKFDAKWCQLKTRKENLLVLFENMRNYQLDKL
MENPDAPIPDNVRVMKDDDIYRLKSVQTTEELKDVHTHFLLYYSHEVPAMQEIAKAKEKQ
KRREEKRREKQKLLEAQEGQENGEEPKIIEDDDEEEEEEQEQETLKQAARSGPYNMCRKA
NLDGFAKRFGLTPEQFSENLRDNYQRHEVEQESAEPLEVAKDYISAKFSSPEDVLHAAKF
MVAMQLAREPLLRKCVREVFYERAKINVKPTKKGMKEIDENHMCYSMKYIKDKPVRDLNG
DQFLRLCMAETDQLVTVTLSDKIESLTSGSYLEEVKQLYNKDEFSKHVQGWNQVRSECVD
LALNKMVFPDLRRELKTILLQEARDSVLRACCRKLYNWIKIAPYTTKFPEEDDDDWDTTH
GVKVMGIAYAPDHSQAAFAAMTAPDGDVTDYLRLPNILKRKNAWNAADKMLKETDLAALR
NFIGTKKPHVIVVGGESRDAQMIQQDVRDIISGLIQDEQFADVKVEIIDNELAKIYSNSK
KGITDFRDYPDLLRQAISLSRKMQDPLVEYSQLCSSDEEILCLRYHTLQDQIPREELLEN
LYLEFVNRTNEVGVDMNLAVQSNXTLNLVQFICGLGPRKGQALLKVLKQTNQRLENRTQL
VTSCHMGPKVFINCSGFVKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYD
DEEMNPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRV
PFQSPSPEELFDMLTKETPETFFIGKMVMATVIGIRHRKPQGEQLDQANPVRNDETGLWQ
CPFCLKNDFPELSEVWSHFDSGSCPGQAVGVRLRLDNGLSGYIHIKNLSDKHVKNPEERV
QQGQTIHCRIIKIDVERFSVDCSSKSSDLADKNNEWRPPKDPYYDQVSEEKDIRHEAEAK
KMKARQQYVKRIIVHPSFHNISFVEAEKIMDQVPQGEVIIRPSSKGADHLTVTWKVTDKI
YQHIDVKETGKENEFSLGSRLWIGNEEFEDLDEIIARHVNPMSSNVRDILNFKYYIDTHG
LKDKSEEALKEEKKKNSSKIHYFISAAKNYPGKFLLSYLPKTKCRHEYITVTPNGFRFRQ
RNFTSLNATLKWFKEHFQEPIPGSTPSTPRTMMSSRTNFTTPGGNSMNPEAIQRVAQNLP
SHMLHSLSQVANQTPHYAHTPGYAASGYINTPYTPSGQTPFMTPYHTTPRYNQGFLHPGS
LSSAPTPSSHSSSSQSPRTQSNRNPYGGSSKNDVMDWQKAAEAWAKLKNKDGQSPRLGTP
RGSGSNRTPRQGDSRSAGDSRKTPQYSDRMSSKSPRSVRSTPQTINSPRSMSIGDATPLY
DEN
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctagactcagaagccgaagaaagcgagcaagaagacgagttagataacaat
gagaggaaaaagttgaaaaagctgaaagctatggatagcgatgaggaagatgaagaagat
gatgaggaacgtttacgtgaagaattgaaagacttaatcgatgatgcccccatcgaggag
gacagtgaaggcgaagacagtgacgcttcggcgggttccaaaaaacgtaaaaagtccgat
gacgatgacgaacttgacgatcgtttggaggatgaagattacgacctgattgaagaaaac
ttgggcgtcaaagtcgaaaggaaacgatttaaacgtctgaaacgtatccaaaatgaagaa
agtggttccgaggatgaggagcacgatcctaatgttgatagagaacaaattgcagaccag
ttgtttgttggtggatctgatgaggaggaagaaagacattcagaaagatcccatcgtgtc
gtcgaaccagaacattacgattcagaagcatccgaaggagaatattctgacgccgacgat
tttattgttgatgatgatggacgtcccatcaccgaaaagaaaaagaaacggagacacata
ttcacagatgcttctctccaagaaggtcaagacatcttcggcgtcgatttcgattacgag
gagtttgaaaaaatggatgaagatgagtatgaagacgaggaagaagatgaggactatgat
gacaccgaaacaggtgaacgtgtccgaaggcctaagaaaacgcctaagaaaaaacctgcc
aagagcatttttgaaatttacgaaccgagcgaacttaaacggggacatttcactgatttc
gacaacgagattcgtaatacggatatcccagaacgtatgcaattgcgtgaagtccctatt
acgagtgttcccgaaggttctaatgaattagaagaagaagccgaatggatttacaaacaa
gccttttgcaaaccctatatttctacacaagactccatgtcttcagatcacagagacagg
cccagaaaaccgccttcgacgattgctaaaataaaacaagccttggactttttgcgaaac
caattgctggaagttccattcatcgcattttatagaaaggaatacgtgcaacctgaattg
aacattaacgatttgtggaaggtttataaatttgatgcaaagtggtgccaattgaagaca
cggaaagagaatttattagttttgtttgaaaatatgaggaattatcaactagataaactg
atggaaaatcctgatgcgccgattcctgataatgtgcgagttatgaaggacgatgatata
tacagattaaaatcagttcagacgactgaggaattgaaagatgtacacacacactttttg
ctttactattcacacgaagtaccggctatgcaggaaattgcaaaggctaaggaaaaacaa
aaacgtagagaagaaaaacggcgcgaaaagcagaaattattagaagcacaagaaggccaa
gaaaacggtgaagaaccaaaaattattgaagacgatgatgaagaagaagaagaggaacag
gagcaggagaccctgaaacaagcagccaggtccggaccttataacatgtgccgaaaggca
aatctagatggtttcgcaaaacgtttcggtctaacaccagagcagttctcagagaacttg
cgagacaactatcaaagacacgaagtggagcaagaaagtgcagagcccttggaagtcgcc
aaggattacataagtgccaagttttcgtctcccgaagacgttttgcatgctgccaaattt
atggtggccatgcaattagcacgggagcccttgttgaggaaatgtgtccgggaagtgttc
tatgaaagggctaagattaatgttaaacctactaagaaggggatgaaggaaattgatgag
aatcatatgtgttacagtatgaagtatataaaagacaaaccggtcagagacttaaacgga
gaccaatttctgaggctgtgtatggccgaaactgatcaactggtcacggttacattgagc
gacaaaatagaaagtctcacctccggcagctatttagaggaagttaaacaactttacaac
aaggatgagttttccaagcacgtccaaggctggaatcaagtccgaagtgagtgcgtggac
ttggcattgaacaaaatggtattccctgatttgaggagagaactgaagactattttgctg
caagaagccagagattctgtactgagggcttgctgcaggaagctgtacaactggatcaag
attgctccgtacacaacaaagtttccagaggaggacgatgacgattgggacacaacccac
ggtgtaaaagtaatgggcattgcctacgcccctgatcattcgcaggctgcttttgcagct
atgactgcacccgatggtgatgtcaccgattatcttaggttgccaaatatattgaagagg
aagaacgcttggaatgctgctgataaaatgctaaaggaaactgatctagcagcccttcgt
aatttcatcggcacaaagaaaccccacgtcatcgtcgtcggcggcgaatccagggacgca
caaatgattcagcaggacgtcagggatattatcagtggcctgattcaggacgaacagttt
gccgatgtcaaagtcgaaattatcgacaacgaactggcaaagatttatagcaactcgaaa
aaaggcattactgacttcagggattacccggatttattgaggcaagcgatatcgctttct
aggaaaatgcaagatcctttggtagaatactctcagttgtgttcgagtgatgaggaaatc
ctttgtttgcgttaccacactttgcaggatcaaatacctagggaagaattgttggagaat
ttgtatctggaattcgtcaatcgaacgaacgaggtcggtgtcgatatgaatttggcagtc
caaagcaacntgacgctaaaccttgtccaatttatttgcggtttaggacctcgtaaaggg
caagctctacttaaagttttaaaacaaacgaatcaaagactggaaaatcgtacgcagtta
gtcacttcttgtcatatgggaccaaaggtttttatcaattgttccggtttcgtaaaaatc
gacaccaattcccttggtgatagtacagaagcctatgtcgaagtcctggacggatctcgt
gttcatccagagacttacgaatgggctcgtaaaatggctgtggatgctctggaatatgat
gacgaggagatgaatcctgcaggagccttggaggagattctggaagcacctgagaggctg
aaagatctggatctggacgcttttgcagaggaattggagaggcagggatttggaaacaag
agtatcactttgtatgatatcagggctgagttgaattcgaggtacaaagacctcagagtc
ccattccaaagtccgagccccgaagaactcttcgacatgctgaccaaagagactccagag
accttcttcataggcaaaatggtaatggccacagtaatcggcatccgtcatcgaaaaccc
caaggcgaacaattagatcaggccaatcctgtcaggaacgacgaaacaggcctatggcaa
tgtccattctgtctcaaaaacgattttcccgaactctccgaagtctggtctcatttcgat
tcgggctcttgtcctggccaagccgtaggagtcagattgagattagataatggcctgtcg
ggttatattcatataaagaatttatcggataaacatgtgaaaaatccggaggagagggtg
cagcagggtcagactatacattgtaggattatcaaaatcgatgtggaaaggttttcggtg
gattgttcgtctaagagttcggatctggcggataagaataacgagtggaggcctccgaag
gatccttattacgatcaggtttcggaggagaaggatattcggcatgaagctgaggctaag
aaaatgaaagctaggcagcagtatgtcaaaaggatcattgttcatccttccttccacaat
atatcgtttgtcgaagccgagaagatcatggaccaagtgccacaaggtgaagtcatcatc
aggccatcgagtaaaggtgccgatcatctgacagtaacttggaaagtcacagataaaatc
tatcagcacatcgatgtcaaagaaacaggcaaggaaaacgagttctcattagggtcaaga
ttgtggatcggcaatgaagagttcgaagacttagatgaaatcattgcaagacacgtcaat
cctatgtcttccaatgttcgagatattctgaatttcaaatactacattgatacacacggt
ttgaaagataaatctgaagaggccttgaaggaggaaaagaaaaagaactcgtccaagatt
cactatttcatatccgccgccaaaaattacccaggaaagtttttattatcatatttgccc
aaaacaaagtgtcgtcacgaatatatcacggttacacccaacggcttcaggttcaggcaa
aggaatttcacatcgttaaatgctaccctaaaatggttcaaagagcatttccaagaacca
attcctggttcaaccccaagtacccccaggacgatgatgtcgtcacgaacaaactttaca
acgcctggaggaaattctatgaatccagaagcgatacaaagggttgctcaaaatttgcct
tcgcacatgttgcattcgctcagtcaagtcgcaaaccaaacaccacattatgcacataca
ccaggatatgcggccagtggttatataaatactccttacactccgagtggtcagactccc
ttcatgacaccataccataccacaccaaggtacaatcaaggatttttacatcctggatcc
ttgagcagtgcaccgacaccttcctctcattcatcgagtagtcaatcgcctaggacacaa
agtaacaggaatccttatggtggtagttcaaagaatgatgtgatggactggcaaaaagca
gcagaagcctgggctaaactgaaaaacaaagatgggcagagtcctcgtttgggtacacct
agaggaagtggctccaaccgaaccccccgccaaggagactccagaagcgccggagactcc
agaaagactccgcagtactccgacagaatgtcaagtaaatcgccgagatcggtaagatcg
actcctcaaacaatcaattcgccaagatcgatgtcgataggcgatgcgacacctctgtac
gacgagaattag
DBGET
integrated database retrieval system
