Ctenocephalides felis (cat flea): 113373906
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Entry
113373906 CDS
T08578
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03018
RNA degradation
cfel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113373906
09123 Folding, sorting and degradation
03018 RNA degradation
113373906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113373906
03041 Spliceosome [BR:
cfel03041
]
113373906
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113373906
mRNA degradation factors
5'-3' decay
Lsm complex
113373906
Spliceosome [BR:
cfel03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113373906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
113373906
NCBI-ProteinID:
XP_026469956
LinkDB
All DBs
Position
Unknown
AA seq
147 aa
AA seq
DB search
MIKELPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMP
ECYIRGSTIKYLRIPDEVIDMVKEETMVKGQRRGDMKGGRGGNQRGRGGGRGSFGGGRGG
KPAPLGRGVNQGGGNVQRNLQSNKKLK
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagagttgcccttatctttattgagaactgctcagaatcatcctatgttggtt
gagttgaaaaatggtgaaacctacaacggtcacttagtaagctgtgataactggatgaat
atcaatttgcgtgaagtgatttgcacctctagggatggtgataaattctggaggatgccc
gaatgctatattagaggaagcacaattaaatacttgcgaatcccagatgaagtcatagat
atggttaaagaagagactatggtgaaaggccaaagacgaggagatatgaaaggagggcga
ggtggaaatcaaagaggtcgtggtggtggaagaggatctttcggaggtggccgtggaggt
aaaccagcacctcttggtagaggagtgaatcaaggcggaggaaatgtacagagaaattta
caaagcaacaaaaaactaaagtga
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