KEGG   Ctenocephalides felis (cat flea): 113374089
Entry
113374089         CDS       T08578                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
cfel  Ctenocephalides felis (cat flea)
Pathway
cfel03013  Nucleocytoplasmic transport
cfel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113374089
  09122 Translation
   03013 Nucleocytoplasmic transport
    113374089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfel03019]
    113374089
   03041 Spliceosome [BR:cfel03041]
    113374089
Messenger RNA biogenesis [BR:cfel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113374089
Spliceosome [BR:cfel03041]
 Complex C
  Other components
   EJC/TREX
    113374089
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113374089
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 eIF2A Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Tricorn_2nd Beta-prop_HPS5 Beta-prop_EML RMC1_N WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N DSE1_N PAC11 NBCH_WD40 Beta-prop_TEP1_C WD40_RFWD3 TRM82_WD Beta-prop_WDR75_1st Peptidase_S9_N PD40 Cytochrom_D1 Beta-prop_EIPR1 Beta-prop_ELP1_1st Beta-prop_ACSF4 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 113374089
NCBI-ProteinID: XP_026470143
LinkDB
Position
Unknown
AA seq 329 aa
MSTAKISEIKKHFVTNNKIREYPAHQAKVHSVGWSCDGRRLASGSFDKSVSIFTLDKDRL
TKEHLFRGHTGSVDQLCWHASQPDLLSTASGDKSVRIWDARVAKCAATINTKGENINITW
SPDGNTIAVGNKEDLVTFIDTKTHKILAEEQYNFEVNEISWNNSSNLFFLTNGQGCIHVM
SYPKLELLHVLKAHPATCICIEFDPTGRYFATGSADALVSLWDAEHLACVRMFSRLEWPV
RTISFSHDGQLLASASEDLLIDIGHTETGEKIADISVDAATFTVAWHPKQYLLAYACDDK
DMSSTYDRKRDAGTLKVWGFPNDTSKSDK
NT seq 990 nt   +upstreamnt  +downstreamnt
atgagtacagcaaaaataagtgaaatcaaaaaacattttgtaacaaataacaaaatacgt
gaatatccagcacatcaagcaaaagtgcattctgtaggctggagctgcgatggaaggaga
ctcgcctcgggctcctttgataaatctgtttcgatttttacattggataaggatagattg
acaaaggagcatcttttccgggggcacactggttcagtggatcaactatgttggcatgca
agtcaacccgatttattgagtactgcaagtggtgataaatccgttagaatttgggatgcg
agggtagcaaaatgtgcagcgacaataaatacaaaaggtgaaaatataaatataacatgg
tcacctgatggaaatacaatagctgttggtaataaagaagatttagttacttttatcgat
accaaaacacataaaatacttgcggaagaacaatataactttgaggtcaatgaaatctca
tggaacaacagcagcaatttattcttcctcaccaatggccaagggtgcattcatgtaatg
agttatccgaagctggaattactgcatgtattaaaagcacatccagcaacttgcatttgc
atcgaattcgatccaactggaagatattttgcaacaggatcagcagatgccttagtttct
ttgtgggatgcagaacatttggcatgtgttaggatgttttccagattggagtggccagtg
aggacgatatcgtttagccatgatggacagttgttggcttctgcttcggaggatttgttg
atagatattggacatacagaaacaggtgaaaagatagcggacatctccgtggacgcggcc
acgtttactgttgcctggcatccgaaacaatatttattagcatacgcctgcgacgacaaa
gacatgtcgagtacgtacgacagaaaacgagatgcaggaacattgaaagtttggggcttt
cccaacgacacatcgaaatctgataaatag

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