Ctenocephalides felis (cat flea): 113376166
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Entry
113376166 CDS
T08578
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113376166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfel00536
]
113376166
Glycosaminoglycan binding proteins [BR:
cfel00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113376166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
113376166
NCBI-ProteinID:
XP_026471870
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
MRCGVACALLCALTLLAACSSVDARTRRAGRHGAQARELARSGVPLADRPQAQQASNGDD
YDYVYDPDLYTDEDENEEDENGNASPRYPEPAPNEVTEIFRQPDDEIPPQTEPPTRPPQR
PQPGSIISPYSCSWNGKWYYEGERFKPSECTECSCSQSTVSCRHIENCRPRGREEPRRPT
PAPTTPPPPPPTTAVPPTPAATTPTPATAAPEPGYDALPIGGEGNASPGPRGDSGYPGER
GRPGDNGAPGSPGSPGIPGMPGPPGPAPDVSLYYQQLAMSQAGADKGPTGSAYAPDQFQY
LQAQVGPVGPRGSPGPPGPAGPQGFQGARGETGEPGPPGPQGTAGPRGLPGLPGKDGESG
EDGEAGQPGAIGPAGPRGLPGMPGLPGMKGHRGFPGLDGSKGEQGNSGEKGSAGSPGPIG
PVGSVGPAGPRGERGREGPPGPPGLRGIDGTAGAPGQPGSIGKPGSPGFPGSPGHKGDQG
SQGPKGSQGLQGPRGESGRPGQPGEVGPQGPQGKDGTPGEKGGPGAPGLSGPPGFPGARG
PPGVSGSPGEPGAKGIPGLAGERGFKGETGNKGDAGAPGPRGVPGAPGAEGKRGKRGMRG
PTGPSGPAGERGPAGGRGLPGPDGAPGVKGQTGDRGPVGPQGIKGSTGDPGRPGGPGLQG
LRGLVGRPGATGKPGNPGERGIQGADGKPGEQGPQGLQGLPGPMGQQGEKGFPGEPGKDG
DPGPPGNAGPRGDVGKDGPQGPPGPPGPSGSDGERGLPGAAGPRGFQGLPGAAGNPGVPG
KDGEAGAHGPPGQPGPAGNRGERGFPGERGPIGQPGATGSRGEPGAQGGDGPAGAPGAKG
DKGHMGPSGLVGLPGMRGQPGLPGEKGERGSLGATGPEGPAGRAGERGPQGPIGPAGPPG
EPAERGDPGPQGPPGEAGAPGGPGERGPVGAQGLQGFPGPQGLSGLPGQKGERGLSGLKG
DQGSPGSPGSPGEQGPQGLTGLTGAKGARGETGARGEPGLMGAPGRPGEPGLAGQPGSVG
PPGPAGIHGMKGATGDTGRPGNPGHQGPPGPPGQEGSKGDTGSEGQTGPMGPAGPQGAPG
DRGLPGLPGPQGPAGARGVRGASGEVGPAGKPGGEGPPGPAGVAGPPGSPGPMGEQGPEG
PSGKSGPPGISGRPGDKGPVGPSGNPGSPGTPGLPGPPGPSGPTGAPGERGQRGEAGPQG
VEGQAGPRGKVGPAGSEGAKGERGEAGAQGAKGHRGLIGLQGLPGHAGPPGEKGIPGAPG
IPGKDGEPGSRGPPGRDGNMGIQGLMGPPGPRGPPGEEGRHGSSGQPGPPGPPGPPGEPL
GYDAAALAALLGQGQFNNQKGPDPLGDEPARLFSKDITEEERKALVLKAYEQLKASFEKF
RKPNGEKTSPGKTCRDIAVAHPELPSGEYWIDPNEGDTRDAILVHCDMPNRATCLLPRPE
KSPEINYIGEEQEIWLGEIQNGMKLTYKADSNQIAFLQLLSAKASQTLTYHCKNSIAYYD
NEKHTYRKGLKLLAYNDAELTPRGNQRFRYDVLEDECKYKKNTWAKTVLSYTTEKATRLP
ILDIAVRDTGAPGQVFWVEVGAACFS
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgcggggtggcgtgcgcgctgttgtgcgcgctaacgctgctggcggcgtgctcg
tcagtcgacgcgcgcacccggcgcgccggccggcacggggcgcaagcacgtgagctcgcg
cgctcgggggtgccactggcggataggccgcaggctcagcaggcttcaaacggtgatgat
tacgattatgtttatgatccggatctctacactgatgaagacgaaaatgaggaggatgaa
aacgggaatgcaagcccaaggtatcccgaaccagcccccaatgaagtgacagaaattttc
cgtcagcctgacgatgaaattcctccacagactgaaccaccaacccgtcctccacagcga
cctcaaccaggttcaattataagtccttattcctgttcctggaatggaaaatggtattac
gaaggtgaacgttttaaaccatcggaatgcacagagtgttcgtgcagtcaatcaacagtc
tcttgtcggcacattgaaaactgtagacctcggggtcgagaagagccacgtagaccgacg
ccagcgccgaccacgcctccaccgccacctcccacaactgccgtacctccgacaccagcc
gcgacaactccaacaccggctactgctgcacctgaaccaggctatgacgctttgccgatt
ggaggtgaaggtaatgcatcgcctggacctcgcggcgattcaggttaccctggcgaacgg
ggacgacctggtgataacggagcgcctggctcacccggaagccccggaatacctggaatg
ccaggacctcctggacctgcaccagatgtttctttatattaccaacaactagccatgtca
caagctggagctgacaaaggtcctacaggttcggcttatgcaccagatcagtttcaatat
cttcaggctcaagttggaccagttggtccacgcggtagccccggcccgccaggtccagcc
ggacctcaaggcttccaaggtgctcgaggtgagacaggtgaaccaggaccgccgggaccg
caaggaactgctggtccaaggggcttacccggtttaccaggaaaagatggtgaaagcggt
gaagatggtgaggctggtcaacccggtgctattggacccgcaggacctcgtggtttacca
ggaatgccgggattaccaggaatgaaaggacatcgcggatttccaggtttagacggcagt
aaaggcgagcaaggaaattctggtgaaaaaggatctgctggcagtccgggacccattggt
cctgtcggatctgtgggccctgcaggcccaaggggcgaacgaggcagagaaggtccacca
gggccacctggacttcgaggaatagatggaacagctggtgcaccgggtcaaccaggaagt
attggtaaaccaggatctccaggttttcctggcagccccggtcataaaggtgatcaaggt
agtcaaggacctaaaggtagccaaggattacaaggaccaagaggagaatctggtcgacct
ggacagccaggcgaagttggacctcaaggacctcagggtaaggatggcactccaggagaa
aaaggaggacctggcgcgcctggattaagtggaccaccaggatttcctggagctagaggt
ccacctggtgtatctggaagtccgggtgaaccaggagctaaaggaataccgggtctggca
ggtgagcgcggctttaaaggagaaactggaaataagggcgatgcaggtgcaccaggacca
cgaggtgttccaggagcaccaggagctgaaggaaaacgaggcaaacgaggtatgcgtgga
ccaacagggccttctggacctgctggagaacgaggacctgcaggaggcagaggtttaccc
ggtcctgacggagcaccaggagttaaaggacaaactggagatcgaggaccagttggacct
caaggaattaaaggtagtactggtgatccaggaagacctggaggcccaggtttacagggt
ttacgcggtcttgtgggtagacctggcgctacaggcaagcctggtaatcctggtgaacgt
ggcattcaaggcgcagatggtaaaccgggcgagcaaggtccacagggtcttcaaggactt
cctggcccgatgggacagcaaggagaaaaaggatttccgggagaaccaggaaaagatggt
gatccaggaccacctggaaatgctggaccaagaggagatgttggcaaagacggaccacaa
ggaccacctggtcctccaggaccttctggcagtgatggcgaaagaggattaccaggtgca
gcaggaccaagaggtttccaaggtctaccgggagcagcaggaaatccaggagtacccggt
aaggacggtgaagccggagcgcatggaccacctggacagccaggtccagcaggaaatcgc
ggagaaagaggattccccggtgaaagaggacctattggtcaaccaggtgctactggttct
cgtggagaaccaggagctcaaggaggagacggtccagcgggagcaccgggagctaaagga
gataaaggacatatgggcccttcaggtttggttggtcttcctggcatgcgtggtcaacct
ggacttccaggagaaaagggcgagagaggttcacttggagctactggtccagaaggccca
gcaggtcgagccggagaacgaggaccgcaaggtccaataggacccgcaggaccccctggt
gaaccagctgaacgcggtgatcctggtccacaaggcccacctggagaagcaggagcacct
ggcggacctggtgaacgcggtccagttggtgcgcaaggtttgcaaggtttcccaggacca
caaggtttatcaggattacctggtcagaaaggagaacgtggtttatctggattaaagggc
gatcaaggcagtccaggatcaccaggatctcctggagaacaaggacctcagggattgaca
gggttaacaggagctaaaggtgcacgaggagaaactggagcgagaggtgaaccgggtcta
atgggagcaccaggtcgacctggagaacctggattagctggacaacctggaagtgttggc
cctccgggcccagctggcatacatggaatgaagggtgctactggtgatacgggtcgccct
ggtaatccaggacatcaaggtccaccaggtccacctggacaagaaggatccaaaggagat
acaggaagtgaaggtcaaactggtcccatgggaccagcagggcctcaaggagcacctggt
gatagaggtcttcctggactaccgggaccacaaggaccagctggtgcacgaggagttaga
ggagcatcgggtgaagttggaccagctggtaaaccaggaggtgaaggacctcctggaccg
gctggcgttgctggaccacctggatccccaggaccgatgggagaacaaggacccgaagga
ccttctggcaaatcaggaccacctggtatatctggcagacccggagacaaaggtcctgta
ggaccttcaggaaatcctggcagcccaggaactcctggattaccgggaccacctggaccc
agtggacctactggagcacctggcgagagaggtcaacgtggtgaagctggacctcaagga
gtagaaggacaggcaggtcctagaggaaaagttggaccggcaggcagtgaaggtgctaag
ggtgaaaggggtgaagctggtgctcaaggtgctaaaggacacagaggtcttattggttta
caaggtttaccaggtcatgctggacctccgggtgaaaagggtatacctggagcgcctggc
attcctggaaaagatggtgaaccaggaagcagaggaccacctggacgagatggcaacatg
ggaatacaaggtttgatgggaccaccaggtcctagaggtcctcctggagaggaaggaagg
cacggttcatctggtcaacctggtcctccaggaccacctggtccaccaggagaaccattg
ggctatgatgcggcagctcttgcagcattgcttggccaaggtcaattcaacaatcaaaag
ggacctgatccgttaggtgatgagcctgccagactattcagtaaggacattactgaagaa
gaacgtaaagcattggttctcaaggcctatgaacaattgaaagcttcattcgagaaattc
cgtaaaccaaatggagaaaaaacatcaccaggaaaaacttgccgagatattgcagtcgca
catcctgaactaccaagcggtgaatattggattgatcctaatgagggcgatacaagagat
gctatattagtacattgtgatatgcctaatagagctacttgtctactaccgcgtccagag
aaatctccagaaatcaattatattggtgaagaacaagaaatctggctgggagaaatacaa
aacggaatgaaactaacatacaaagcagatagcaatcaaatcgcattcctacaactgctc
tctgcaaaggcatcgcagacattaacataccattgtaaaaattccattgcttattatgat
aatgagaagcacacgtaccgaaagggattgaagctgctcgcttataatgatgccgaactc
acacctcgtggaaaccaacgcttccgatatgatgttctggaagatgaatgcaagtacaag
aaaaacacttgggccaagactgttctctcgtataccaccgaaaaggcaacgcgtttgccc
attcttgatatcgctgttcgtgatactggtgcaccaggacaagtattctgggttgaagta
ggtgccgcctgcttctcatag
DBGET
integrated database retrieval system
