Ctenocephalides felis (cat flea): 113377126
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Entry
113377126 CDS
T08578
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cfel
Ctenocephalides felis (cat flea)
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfel03009
]
113377126
Enzymes [BR:
cfel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113377126
Ribosome biogenesis [BR:
cfel03009
]
Eukaryotic type
90S particles
Helicases
113377126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
AAA_22
HEM4
Flavi_DEAD
Acid_PPase
PBP2
Motif
Other DBs
NCBI-GeneID:
113377126
NCBI-ProteinID:
XP_026473117
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MDMRDIFVKLVKGAKFTKKRTNSNSHMSRTQVTKVEPKTAVKSEPVESVERPDSTNCIDE
ENSDRTISLLGSISATENGNIMRRKRKRKVITEELQDKLKQEEINHYRNLNLISVVGRNV
PAPIKCFEELKSTYNVDSLLMQNLQSCGYDDPTAVQKQAMTAMLEKRQILCCAPTGSGKT
MAFMLPLLNHLGRAEKRGFRAVILCPTRELAKQILRECLRLSDGTSLKPHFIYKVQQEAK
RYSAKTFMKFDLLITTPKRLCFMLNQDPVLISLENVEWLVIDEADKLFETGIRSFRDQLD
KILLACSNKNRKIALFSATQTPAISKWARHNMKGLINITIGQRNSAADTVDQELLFVGDE
SGKLLAVRDLIRKGIKPPVLVFVQSKERAQELFTELIYDGINVDVIHADRTETQRDNTVR
AFREGRVWVLICTELMGRGVDFSGVNLVLNYDFPTSAISYIHRIGRTGRAGQRGKAITFY
TQNDVVNLRSIARVLQSSGCKVPEYMLTLKKTSKKNKKLLKTSAPKRDGILTIPNYEKTK
IKRKRQRLEKAKLEIVGVSSSDEETLSKPRRPMKRPKSSKNLSAKGKEQSQSFKHKKIQK
KNTDDQTKHQNNNGCVSK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcgtgatatatttgtgaaattagtgaagggcgctaagttcactaaaaagaga
accaattctaattcacatatgtctcgaactcaggtcacaaaagttgaacctaagacggca
gtaaagtcagaaccggtagaaagtgtcgaaaggccggattcaacaaattgcatagatgaa
gaaaatagtgacaggaccatttctttattgggttctatttcagcaactgaaaacggtaat
atcatgagacgtaaaaggaaaaggaaggtaataaccgaagaactgcaggacaaattgaag
caagaagagattaatcattacagaaatttaaatcttataagtgtggttggaagaaatgtt
ccagctcccattaagtgttttgaagaattgaaatcaacgtataatgttgactcattgctt
atgcaaaatttgcaaagctgtggatatgatgatccgacagctgtacaaaagcaagcaatg
acggctatgcttgagaaacgacaaattctgtgttgtgctcctacagggtctggaaaaact
atggcctttatgttgcctcttctaaatcatttaggaagagctgaaaaacgaggttttagg
gctgtgattctttgtccaacccgagagttagcaaaacaaatattaagagaatgtttacgt
ctcagtgatggtacttctcttaaacctcattttatttacaaagtccagcaggaagcaaaa
agatacagtgctaaaacattcatgaagtttgatctattgattacaacacctaaaagactt
tgtttcatgttgaaccaagatccggtcttaatttccttggaaaatgttgagtggttagta
atcgatgaagcggataagttatttgagactggtattcgaagtttccgagaccaattagat
aagattctcttagcatgttctaataaaaatagaaaaatagccctatttagtgccactcaa
actccagctatttccaaatgggccaggcacaatatgaaaggtctcattaatatcacaatc
ggacaaagaaattcagctgctgatacagttgaccaagagctactttttgtaggtgatgag
agtggaaaattattagcagttcgagatttgatacgaaaaggcatcaagccaccagtattg
gtatttgtacaaagtaaagaacgtgctcaggagctttttactgaacttatctatgacggg
ataaatgtagatgttatccatgctgacaggacggagacacaaagagataacacagtgcgt
gcatttagggaaggtcgtgtatgggtcctgatatgtaccgaattgatgggccgaggagta
gattttagtggggtcaatttggtactgaattatgattttcctacttcggccatctcttat
attcatcgtattggtcgtacaggcagagctggtcagagaggaaaagctattacattttat
actcaaaatgatgttgttaacttaagaagcatagcacgagttttacaatcatcaggttgc
aaagttccagagtatatgttaacacttaaaaagacttcaaagaaaaataaaaaattatta
aaaacatctgcaccaaagagagatggaattcttaccattccaaattatgaaaaaactaaa
attaagaggaaaaggcagcgtttagaaaaagcaaaattagaaatagttggagtttcatca
tcagatgaggaaactttatccaaacccaggaggcccatgaaaagaccaaaaagtagcaaa
aatttatcagcaaaaggcaaagaacaaagtcaaagttttaagcacaaaaaaatccagaag
aaaaataccgacgatcaaactaagcaccaaaataataatggttgtgtcagtaaatag
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