Ctenocephalides felis (cat flea): 113377284
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Entry
113377284 CDS
T08578
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113377284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfel03400
]
113377284
DNA repair and recombination proteins [BR:
cfel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113377284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
AAA_29
Motif
Other DBs
NCBI-GeneID:
113377284
NCBI-ProteinID:
XP_026473328
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MANLKPLQALNLDANQQQSFVRYYNSLDKKPATTIRFFNRVDYFTLHDEDALFAATEVFK
STSNVKVMGLPPNMLKYIVLSKGNFENFVRDLLLVKQYRVEVYTNQGLSKNNDWVIQHKG
SPGNLAQFEDLLFSNNNVTESSLIMAMQICGESQNKTLAVAFADADNCSFSVHEFVDNDV
YSELEALIVQISPKECLMPKANTSEIDKVKAMLERCNILVTQLKKSDFECKDIVQDLDRL
ICFDEGQKNSANALPEINMKHAMGSLAAIIKYMNFVSDNSYEKQFKFTQLDMKRFVHMDS
AAISALNILPKNTFRTGRMQKHHSILGLLGHCRTSQGQRLLAKWVKQPLRDINEINERHD
IVENFVNDNELRQNLHNDFLKRIPDFQMLSRKLLRKKANLQDCYRLYQAIEKLPQLAALL
SRNQNSVVKNVFVEPLIDCIQSMEKYQQMIEQNVDLDQIQHGEYFLKPNLDVEFQALYDE
MRTYEKKIDSCFSKAARELGLESGKTIKLDSNPQLGHFFRVTLKEEPVLRKNSDFKILDA
VKGGVRFTNDRLQQLNDDYSIARKSYQDRQSVIVNEIIDIAAGYGEPLTMLSLLIAKLDV
LVSFAVSACEAPQKYIRPNMLNSDVGKIKLNGIRHPCLELQEDMSYIPNDVEFDKDGTTM
HIITGPNMGGKSTYIRSVAVAVHMAHIGSFVACESADISIIDSILGRVGAEDSVTKGLST
FMIEMIETSGILKVATNKSLVIIDELGRGTSTYEGCGIAWAIAEYLATEVKSFTLFATHF
HEITRLAEDCSNVRNAHVSALCDGDVFTLLYRIRPGVCNKSFGIQVARMANFPEEVVKYA
EHKHSELEDNTVDADFKTIEEADKIIESFLKKCKEDISELNDQQLKQKLDLCFQELNETN
NNYLKALLTRFKL
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttaaaacccctacaagctctaaatttagatgcaaaccagcaacagagcttt
gtgcggtattataacagtttggataagaaacctgcaacaacgatacgattcttcaatcga
gttgactattttacattacatgatgaagatgcattgtttgcggctacagaggtttttaaa
tccacttcgaatgttaaagttatgggcctaccgccaaatatgctaaaatatattgttttg
agcaaaggaaattttgaaaattttgttagagatttgttgctagttaaacaatatcgtgta
gaagtttacacaaatcaagggttatcaaaaaataatgattgggttattcaacataaaggt
tctcctggcaatttagcacaatttgaagatctattatttagcaacaacaatgtaactgaa
agttcgttaataatggcaatgcagatatgtggggagtcccaaaataagacattggctgtt
gcatttgctgatgcagacaattgttcattttcggtacatgaatttgtagataatgatgtg
tactcagaattagaagctttaattgtacagatcagcccaaaagaatgcttaatgccaaag
gctaatacatctgagatagataaagtaaaagcgatgttagagcgatgtaatatcttagta
actcaattgaagaaatctgattttgaatgtaaggatatagttcaggatttggatagactt
atatgttttgatgaaggtcaaaaaaattctgcgaatgctttacctgaaattaatatgaaa
catgcaatgggttctttagctgcaataattaaatatatgaattttgtttctgacaactct
tatgaaaagcaatttaaattcacacaattggatatgaaacgatttgtgcatatggattca
gcagcaataagcgctttaaatatattgccaaagaatacttttcgtactggtagaatgcag
aaacatcatagtattttaggattgctaggtcactgtcgaacatctcaaggccagagactt
ctggctaagtgggtcaaacaaccactgcgtgatattaatgaaataaatgaacgccacgat
attgtggaaaattttgttaatgataatgaattgaggcagaatttacataatgattttttg
aaaagaattccagattttcagatgttatctagaaaattattgcgtaagaaagcaaattta
caagactgctataggctatatcaagccatcgaaaaattacctcagttagcggctttgcta
tctagaaatcagaattctgttgtgaaaaatgtgtttgttgaaccattaattgattgtata
cagagcatggaaaaatatcagcaaatgatagaacaaaatgttgatcttgatcaaattcaa
catggggaatattttttaaaaccaaatttggatgttgaatttcaagctttgtatgatgaa
atgcgaacttatgagaaaaaaatagattcatgtttttcaaaagcagcgagagagttggga
ttagaaagtggcaaaactattaagcttgatagcaatcctcaattaggtcatttttttcga
gttactctaaaagaggaacctgtactaagaaaaaattctgacttcaaaattcttgatgca
gtcaaaggaggtgttcgttttacaaatgaccgactgcaacagttaaatgacgattattcc
atagctcgcaaatcttatcaagatagacaatcagttattgttaatgagataattgatata
gctgctggttatggcgaaccacttacaatgctttctttacttattgctaaacttgatgta
ctcgttagctttgcagtatctgcttgtgaagcacctcagaaatatattcggcctaatatg
ctaaatagtgatgtcggcaaaattaaattgaatggaatcaggcatccatgtttagagtta
caggaagacatgagttatatacccaatgacgtcgaatttgataaagatggtacaacaatg
cacattataactggccctaatatgggtggtaaaagtacatacattcgttcagtggctgtt
gctgtgcatatggcccatataggttcttttgttgcttgtgaaagtgctgatataagtata
attgacagtattttgggtagagtaggtgccgaagacagtgttacaaaaggccttagcacc
tttatgattgaaatgattgagacttctggcatccttaaggttgctacaaataaatctttg
gtgatcatagatgaattaggcaggggaacatcaacttatgaaggttgtggaattgcttgg
gccattgctgaatacttagctactgaggtaaaatcatttaccctatttgctactcatttc
cacgaaataacgagactggctgaagattgttctaatgttcgcaatgctcatgtatccgcc
ttatgtgacggcgatgttttcactttattgtatcgtattagacctggtgtttgtaataaa
agctttggaatacaagttgctagaatggcaaactttcctgaagaagttgtaaagtatgct
gaacataagcattcagaattagaagataacacagtagatgctgattttaaaactattgag
gaagctgataaaattattgaaagttttctaaagaaatgcaaggaagatatttcggaattg
aatgatcaacaattgaagcaaaaattggatttatgctttcaggaactaaatgaaaccaat
aataattacttgaaagcacttttgaccagatttaagttatag
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