Ctenocephalides felis (cat flea): 113378650
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Entry
113378650 CDS
T08578
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113378650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113378650
03012 Translation factors [BR:
cfel03012
]
113378650
Enzymes [BR:
cfel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113378650
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113378650
Translation factors [BR:
cfel03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113378650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
ATPase
AAA_22
nSTAND3
AAA_19
ResIII
AAA_23
NPHP3_N
RsgA_GTPase
AAA_16
Sigma54_activat
AAA_29
GNAT_acetyltran
Motif
Other DBs
NCBI-GeneID:
113378650
NCBI-ProteinID:
XP_026474997
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MKAKAMSRGGHRGSRRGFRTPVNYPPNNSSDDDEINKNTETSKNKRPTKYSPASYNFNLG
RGNDGPSYHFRKRFQKNRGGPPADIPVIRISQRKVDKISSLLNTPDIKKFSYLSEHCMPY
YFKQLASNESFEERLERANKNKITQDDALNQELQSEFINKHDNMTYKTMQKSRKALPAFQ
MKDQILNXIQDNQVTLISGETGCGKTTQVAQFLLDDALMSGNGSVCKIACTQPRRISAIS
VAERVASERNENCGXKVGYQIRLEKVMPRKSGSILFCTTGILLQTLESSPVLQEYSHLII
DEIHERDVNCDLLLTVLKENIIPHRXDLKVILMSATLNAEIFSNYFDKCHIITIPGFCYD
VEEFYLEDVLEELNFYSFKTATGHNAREIGKAYNDQIYKEMSSYIQKNKNKFSKKVIQAL
LNPLSEDINLELISKLIWHICDTQPDGAILIFLPGLDTISKLHKSLLSESDKYNKSVQIY
PLHSKLSTANQKKIFESPPEGVRKIIVSTNIAETSITIEDIRYVINCGKSKXKSFDADLN
LDSLKDEWISVANMKQRKGRAGRTREGKCYHLFSRPRMTLLKEFQMPEMLRMRIEEVILK
IKLLQLGNISEFLAKVLDPPDEKVVQFSIEFLQRLNALDSEENLTLLGYQLAQLPMDPQV
GKMILMDVEFISVNGFKLISELLSEEGASYSDYEFEETSSD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaagcaatgagcagaggaggtcacaggggttctagaagaggttttcggaca
cctgttaattatccacctaataatagttccgatgatgatgaaattaacaaaaatactgaa
acaagtaaaaacaagcgtcctacaaaatattcccctgcgagctataacttcaatttggga
agagggaatgatggtccatcataccacttccgtaaacggtttcagaagaataggggtgga
cctcctgcagatatacctgtaataagaatcagccaaagaaaagttgataaaataagctcg
ttgctcaatacacctgatataaaaaaattttcatatttatctgagcattgtatgccctat
tactttaaacaattagcttctaatgaatcatttgaagaacgattagaaagggcgaacaaa
aataaaattacacaagatgatgctctgaatcaggaactgcaatcagagtttataaataaa
catgacaatatgacttataaaacaatgcaaaagtctcgcaaggctttgcctgcgttccag
atgaaggaccaaatattaaacnatattcaagacaatcaagttacattaataagcggtgaa
actggatgtgggaaaacaacacaggtagcccaatttttattagatgatgctttaatgtct
ggaaatggcagtgtatgtaaaattgcttgcactcagcccagaagaatcagtgcaatttct
gttgcagaaagagtggcatccgaaagaaatgaaaattgtggtngtaaggtaggataccag
attcgacttgaaaaagttatgcccagaaaatctggtagtatattattttgcaccactgga
atacttctacaaaccttagaaagcagtcctgtactgcaggaatattcacacctcatcatc
gacgaaatacatgagagggatgttaattgcgatctgctattaacagttttaaaagagaac
attattcctcatcganaagatttaaaagtgatattaatgagtgctacattgaatgcagaa
atcttctcaaattattttgataaatgccatattattacaataccaggtttttgttatgat
gttgaggaattttatttggaggacgtgttagaagaattgaacttttacagttttaaaact
gctacaggtcacaatgcaagagaaataggaaaggcttataatgatcagatatacaaagaa
atgtcctcatatatacaaaaaaataagaacaaatttagtaaaaaagttatacaagcttta
cttaatcccctctcagaagatatcaatttggaactaatttcaaaactgatatggcatatt
tgtgatacacagcccgatggagctattttgatatttctaccgggactcgacactatctcc
aagttacacaaatctttgctgagtgaatctgataaatataataaatctgtccagatttat
cctttgcattccaaattatcgactgcaaatcaaaagaaaatcttcgaaagtcctccagaa
ggtgtgagaaaaataattgtatcgacaaatatagcagaaaccagcatcacaatcgaggat
attagatatgtaataaattgtggcaaatccaaantaaaatcgtttgacgctgatttgaat
ttagacagccttaaggatgaatggataagtgttgctaatatgaaacaacggaaaggtcga
gctggtaggactagggaaggaaaatgttatcatttgttcagtagaccgaggatgactttg
ctgaaagaatttcagatgccggaaatgttacgaatgagaatcgaggaagtaattttgaaa
attaagctcttgcagcttggaaacatatcagagtttttggcgaaagtactagatccaccc
gatgagaaagttgtacaattttctattgaatttctacaaagattaaatgctctagattcg
gaagaaaatttgactttactaggatatcaattggcacaattgccaatggatccccaagtg
ggaaaaatgattctgatggatgtagaattcataagcgttaatggattcaaattgatttcg
gagttattgtctgaagaaggtgcatcgtattcggactatgaatttgaagagacttcttcg
gattga
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