Ctenocephalides felis (cat flea): 113378662
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Entry
113378662 CDS
T08578
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113378662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113378662
03012 Translation factors [BR:
cfel03012
]
113378662
Enzymes [BR:
cfel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113378662
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113378662
Translation factors [BR:
cfel03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113378662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
ATPase
nSTAND3
AAA_19
ResIII
RsgA_GTPase
AAA_7
Rad17
Sigma54_activat
AAA_16
AAA_29
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
113378662
NCBI-ProteinID:
XP_026475003
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MKAKAMSRGGHRGSRRGFRTPVNYPPNNSSDDDEINKNTETSKNKRPTKYSPASYNFNLG
RGNDGPSYHFRKRFQKNRGGPPADVRAGDNISWYRDRIKKEQQQENMKKIPVIRISQRKV
DKISSLLNTPDIKKFSYLSEHCMPYYFKQLASNESFEERLERANKNKITQDDALNQELQS
EFINKHDNMTYKTMQKSRKALPAFQMKDQILKHIQDNQVTLISGETGCGKTTQVAQFLLD
DALMSGNGSVCKIACTQPRRISAISVAERVASERNENCGVSVGYQIRLEKVMPRKSGSIL
FCTTGILLQTLESSPVLQEYSHLIIDEIHERDVNCDLLLTVLKENIIPHRKDLKVILMSA
TLNAEIFSNYFDKCHIITIPGFCYDVEEFYLEDVLEELNFYSFKTATGHNAREIGKAYND
QIYKEMSSYIQKNKNKFSKKVIQALLNPLSEDINLELISKLIWHICDTQPDGAILIFLPG
LDTISKLHKSLLSESDKYNKSVQIYPLHSKLSTANQKKIFESPPEGVRKIIVSTNIAETS
VTIEDIRYVINCGKSKIKSFDADLNLDSLKDEWISVANMKQRKGRAGRTREGKCYHLFSR
PRMTLLKEFQMPEMLRMRIEEVILKIKLLQLGNISEFLTKVLDPPDEKVVQFSIEFLQRL
NALDSEENLTLLGYQLAQLPMDPQVGKMILMASLFSCVRPIFSIAASLAFKDAFVYPLDR
ERDVDRSKRRLAKNTRSDHLMLAEALSGFEEAQKNEEETSYCRENFLSASTLRLLQNMTK
QFGDQLYEKKLLYSSDIGDPVSNVQSTNQNVVKSIISAGLYPNVAFIRLISELLSEEGAS
YSDYEFEETSSD
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaagcaatgagcagaggaggtcacaggggttctagaagaggttttcggaca
cctgttaattatccacctaataatagttccgatgatgatgaaattaacaaaaatactgaa
acaagtaaaaacaagcgtcctacaaaatattcccctgcgagctataacttcaatttggga
agagggaatgatggtccatcataccacttccgtaaacggtttcagaagaataggggtgga
cctcctgcagatgtacgtgcaggagataatatttcgtggtaccgtgatcgtataaagaag
gaacagcaacaagaaaatatgaaaaagatacctgtaataagaatcagccaaagaaaagtt
gataaaataagctcgttgctcaatacacctgatataaaaaaattttcatatttatctgag
cattgtatgccctattactttaaacaattagcttctaatgaatcatttgaagaacgatta
gaaagggcgaacaaaaataaaattacacaagatgatgctctgaatcaggaactgcaatca
gagtttataaataaacatgacaatatgacttataaaacaatgcaaaagtctcgcaaggct
ttgcctgcgttccagatgaaggaccaaatattaaaacatattcaagacaatcaagttaca
ttaataagcggtgaaactggatgtgggaaaacaacacaggtagcccaatttttattagat
gatgctttaatgtctggaaatggcagtgtatgtaaaattgcttgcactcagcccagaaga
atcagtgcaatttctgttgcagaaagagtggcatccgaaagaaatgaaaattgtggtgta
agcgtaggataccagattcgacttgaaaaagttatgcccagaaaatctggtagtatatta
ttttgcaccactggaatacttctacaaaccttagaaagcagtcctgtactgcaggaatat
tcacacctcatcatcgacgaaatacatgagagggatgttaattgcgatctgctattaaca
gttttaaaagagaacattattcctcatcgaaaagatttaaaagtgatattaatgagtgct
acattgaatgcagaaatcttctcaaattattttgataaatgccatattattacaatacca
ggtttttgttatgatgttgaggaattttatttggaggacgtgttagaagaattgaacttt
tacagttttaaaactgctacaggtcacaatgcaagagaaataggaaaggcttataatgat
cagatatacaaagaaatgtcctcatatatacaaaaaaataagaacaaatttagtaaaaaa
gttatacaagctttacttaatcccctctcagaagatatcaatttggaactaatttcaaaa
ctgatatggcatatttgtgatacacagcccgatggagctattttgatatttctaccggga
ctcgacactatctccaagttacacaaatctttgctgagtgaatctgataaatataataaa
tctgtccagatttatcctttgcattccaaattatcgactgcaaatcaaaagaaaatcttc
gaaagtcctccagaaggtgtgagaaaaataattgtatcgacaaatatagcagaaaccagc
gtcacaatcgaggatattagatatgtaataaattgtggcaaatccaaaataaaatcgttt
gacgctgatttgaatttagacagccttaaggatgaatggataagtgttgctaatatgaaa
caacggaaaggtcgagctggtaggactagggaaggaaaatgttatcatttgttcagtaga
ccgaggatgactttgctgaaagaatttcagatgccggaaatgttacgaatgagaatcgag
gaagtaattttgaaaattaagctcttgcagcttggaaacatatcagagtttttgacgaaa
gtactagatccacccgatgagaaagttgtacaattttctattgaatttctacaaagatta
aatgctctagactcggaagaaaatttgactttactaggatatcaattggcacaattgcca
atggatccccaagtgggaaaaatgattctgatggcctcgttgttcagctgcgtgcggcct
atattttctatagctgccagtttagcttttaaagacgcttttgtttatcctctggatcgt
gagagagacgtagaccgcagtaaacgaagactagcgaaaaataccagaagcgaccatttg
atgctggccgaagccctatctggtttcgaagaagcgcaaaaaaatgaagaagaaacgagt
tattgccgggaaaactttctaagtgcttccacattacgacttcttcaaaatatgacgaaa
caatttggcgatcagttgtatgaaaaaaaacttttatactctagtgacattggagatcca
gttagtaacgttcagtcgacaaatcaaaatgtggtgaagtccatcatttctgcagggtta
tatccaaatgttgctttcataagattgatttcggagttattgtctgaagaaggtgcatcg
tattcggactatgaatttgaagagacttcttcggattga
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