Ctenocephalides felis (cat flea): 113378722
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Entry
113378722 CDS
T08578
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03013
Nucleocytoplasmic transport
cfel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113378722
03015 mRNA surveillance pathway
113378722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113378722
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113378722
mRNA cycle factors
P-body specific factors
113378722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Cauli_VI
DUF4139
Motif
Other DBs
NCBI-GeneID:
113378722
NCBI-ProteinID:
XP_026475078
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MELKQDETTPMEVEEKTDDLEILKNYIEETKIRLQNKIDIRNGNLNCEVLPDSHFSKLDS
SLKKNTTFVKKLKTFSANQLDSLLKDLSGLNLTKYISEVAAALVEAKLKMTDIPAIIKLC
STLHQNYPEFSQSFFENWQKNLTIKPNEKVANPSKLRVDIRLYAELINAGIFTNKNCLPL
LGTILTTLINNDKEEHNNIATILSFCKHCGEDYAGLVPTKIRQLAEKYNMEVPKPNILPP
EKQNNVRTILREYYTSITKHLTTEHINLQALERANRRTLQTKGELSADRKDKTDALQASY
EKLLAATGQFSELLDLPMPELPVEKIVPESEGGVMEGIVEAVTSPMDPWEDDETKAFYED
LPDLRQYLPNYCAKEKSEDISTISPEVLDSDNPDLLLNEDTQITETIETEIEENTPSNTK
QMLEAFLSNLCNCVNKEMIDSAAIDFLLNLNTKHGRKKLAKNLFGVSRTRLDLLPFYARL
AATVSLVNADVGNDLAQMLKQDFKYHVRKKDQINIESKIKVVRYIGELVKFQLYSKMEAL
FCLKILLLDFQHHHIEMACAFLEVCGKYLYNHMESRQRTLIYLEQIMRIKTVSVLDSRHV
AQIESVYYLVRPPDSTNVIQKVRLPIHQYIRNLIYQDLCKMNIDKILKLLRKIDWNDKNI
ANYAIKCLTNAYNVRYHLIRCLADLLAGLSSHQEKAVYKVVDGVFEDIRNSLENYTPKFA
QRRIAMAKYLGELYNYRLIESADILKTLYAIISLGVTMSYNIVSEVDPPASLFRLKLACV
LLETCAQYFTSSLSRKRMDYFLIFFQNYYWFKKNDPIWETEKYPLLFDHEYKDSLQSIGR
KITIYNSFEECQEAIDNLKKMLYPNLGEESNENDVTDSLNTIEEETEGEEVDETDGDVVN
SHEDSEMDLKNNDDEELTEEFSEQEGISSTEDVKVKLLNTTPRDTEEDQLFQQALDKMMA
ENCQERLKDTAKMRRDDIVVPMIARNNKKNYDQIQDVASNETSKEVPFVLMLRKGTKQQY
KSFSAPVDSQLAINLKSKEQEIKEEKERVKRLTLNITERLEEEDYQEMLAANSRQNTTTH
HNSNRDRAKGIGRFKHQKGAPDADLIFGTK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaaacaagatgaaacaactcctatggaagttgaggaaaaaactgatgatcta
gaaattttaaaaaattacatcgaagaaaccaaaattcgactgcagaataaaatagatatt
cgtaatggtaacttaaattgcgaagttcttcctgattctcatttttcaaaactagattcc
agtttaaagaaaaataccacatttgtcaaaaaattaaaaacctttagtgcaaaccaatta
gattcattattaaaagatttatcagggttgaatttgacaaaatacatatcagaagtcgct
gcagctcttgtggaagcaaaactcaaaatgactgatattccagctattattaaattatgt
agtactttacatcagaattacccagaattttcacaaagtttctttgaaaattggcaaaag
aatttaaccataaaaccgaatgagaaagttgcaaatcctagtaaattaagagttgatata
agactttatgcagagcttataaacgctggaatttttacgaataaaaattgcttaccttta
ttgggaactattttgactactttaatcaataatgataaggaggagcataataacattgct
acaatattatccttttgtaagcattgcggagaggattacgcaggtcttgttccaacaaaa
ataagacaattagcagaaaaatataatatggaagtaccaaaaccgaacattttgccacca
gaaaaacaaaataacgttagaactattttaagagaatattatacttccattaccaagcat
cttacaacagaacatattaatcttcaagcactagagagagcaaatagacgaactttgcaa
actaagggagaactcagtgcagacagaaaagataaaacagatgcattacaagcttcatat
gaaaaattacttgcagctacaggtcaattttcagagttgttagatttgccaatgccagaa
ttacccgttgagaaaatagtaccagaaagtgaaggtggagttatggaaggtatagtggaa
gcagtaacttcacctatggatccctgggaagacgatgaaacaaaggcattctatgaagat
ctaccagatcttagacaatatttaccaaattattgtgccaaggagaaatcagaagacata
tcaacaatatctccagaggtattagattctgataatcctgatcttttattaaatgaagat
actcaaattacagaaacaattgaaacagaaattgaggaaaacacaccatcaaatacgaaa
caaatgttagaagcattcttatctaacttatgtaattgtgtcaacaaagaaatgattgat
agtgctgcaattgattttctgcttaacttaaatactaaacacggtcgcaaaaaattagct
aaaaatttgtttggtgtttctagaaccagacttgatttactaccattttatgcacgtttg
gctgcaaccgttagtttagtaaatgcagatgtgggcaatgacttggctcaaatgttaaaa
caagactttaaataccatgttcgtaaaaaggatcaaataaatatagaatctaaaataaaa
gtagttagatatattggagaactagttaaatttcagttgtattctaaaatggaagctcta
ttttgtttaaagattttgttattagactttcaacatcatcatattgaaatggcttgtgca
tttttagaggtctgtggaaaatatttgtataatcacatggagagcagacaaagaacttta
atttatttagaacaaataatgagaataaaaacagtatctgttttagactctaggcatgtc
gctcaaatagaaagtgtctattatttggtgagaccaccagattcaaccaatgtaattcaa
aaagtacgactgcccatccatcaatatatacggaacttgatttatcaagacttgtgcaaa
atgaatattgataaaattctcaagttactccggaaaattgattggaatgataaaaacatt
gcaaactatgctattaaatgtctaactaatgcttacaatgttcgatatcacttaattcga
tgcttagcagatttacttgccggattgagttcacatcaagaaaaagctgtttataaagta
gttgatggagtttttgaagatatcaggaatagtttggaaaactatacaccaaaatttgct
cagcgcagaatagctatggctaaatatcttggagaactttataactatcgtctcatagaa
tcagcagacattctaaaaacactttatgccatcatttccttaggagtcaccatgagttat
aatattgtttctgaagttgatccacctgcaagtttgtttcgattaaaactagcatgtgta
ttactcgaaacttgtgcccaatatttcacaagctcactcagtagaaagcgcatggattac
tttttgattttcttccagaactattattggtttaagaaaaatgatccaatttgggagaca
gaaaaataccctttgctttttgatcatgagtataaggatagtttgcaatcaattggaaga
aaaattacaatttataactcttttgaggaatgtcaggaggctatagataatctgaaaaag
atgttatatccaaatttaggtgaagagtcaaatgagaatgatgtcaccgattcattgaat
actattgaagaagaaacagaaggggaagaagttgatgaaactgatggagatgtagtgaat
tctcatgaagattcagagatggacttgaaaaataatgatgatgaagaattaactgaagaa
ttttctgaacaagaaggcattagtagcactgaagatgttaaggttaaattattaaatact
actccaagagatactgaagaagatcaactcttccaacaagctttggataagatgatggca
gaaaattgccaggaaaggcttaaagatactgctaagatgcgacgtgatgatattgttgta
ccgatgatagcaaggaataataagaagaattatgatcaaatacaggatgtggcttcaaac
gaaacaagtaaagaagtgccgtttgttttaatgcttcgaaaaggcacaaaacagcaatat
aaaagcttcagtgcccccgtagattcacaactcgccattaatttaaaatcaaaggaacaa
gaaataaaagaagagaaggaacgcgttaaacgactaacacttaatatcactgaacgactt
gaagaagaagactaccaagaaatgttagctgctaattctagacaaaatacaacaacacat
cataattcaaatagagatagagctaaaggcattggacgattcaagcatcagaaaggagca
cctgatgcagatttaatttttggcaccaaatga
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