Ctenocephalides felis (cat flea): 113378828
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Entry
113378828 CDS
T08578
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113378828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfel03021
]
113378828
Enzymes [BR:
cfel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113378828
Transcription machinery [BR:
cfel03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
113378828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
113378828
NCBI-ProteinID:
XP_026475228
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MPKEQFRQTDRVKDISHVTFGVDSAESIQQQAHIQIFDKNLYSQGGQRIPTQYGVMDRRM
GTSEKDAKCETCNKGLTDCMGHYGYLDLALPVFHVGYFKHIINILQTICKTCGHVMLKPA
DKKILTRRMMNPNITCLQKKQLRAQVLDKAKKLSKCPNCEAINGIVKKNPGGFMKIVHDK
FRGKKPTDTLVTSYLDSMAEAREENRDLGQVGNSALAQDLNPVEVLKLFKKVPDSNIFLL
GMNTTRSRPADLILTRILVPPVCIRPSVVSDIKAGTTEDDLTMKLSEILLINEVIKKHML
TGGKVELIQEDWDFLQLHCALYFNSEVTGVPLGMQPKKSSKGLVQRLKGKQGRFRGNLSG
KRVDFSARTVISPDPNLQIHQVGVPVYVAKVLTYPERVHPANLQRMKQLVKNGPDVHPGA
NYVQQKGSDFKKFLQYGNRAKIAQELKCGDTVERHLCDGDVVLFNRQPSLHKLSIMCHRA
KVQPQRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNTSNLVTPRNGELT
IAATQDFITGGYLLTQRDEFLTHEQAMQLAACFLAGPDATLQIDLPEPAILKPRRLFTGK
QIFSLLLKPNKECPVMANLVTSGRNYTKNKDMCVRDSFVIIRNSELLCGSMDKKTLGSGT
KNSIFYILLRDWGEEVACKAMWRLARLASYFLMNRGFSFGISDVTPSARLIELKNMLLEQ
GYKKCDEYIAEMKKGTLTCQPGCTAEETLESMMLKELSSIRETAAKACFAELPPTNAPLI
MAQSGSKGSNINISQMIACVGQQAINGKRVPNGFEDRALPHFEKFSKNPASRGFVENSFF
SGLTPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDIVVHYDNTVRNAVGQVVE
FIYGGDGLDPVYMEGKDRPVDLSRVLEDVKARNPCRDEPTLRYNEILDYYKELISSSDYD
CLSEDFKKEQLAFVHDVAENVQKIQQKYGLNLIVTRELERLTKGQLKVFMETCKVKFLRA
KIEPGTAIGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRILEIINASKTISTPVI
SAELDNNTDMEFAFRVKGRIEKTTLGEITSFIQEVYRGDECYLVIRLDIDRIRILRLELD
ANTIKYALCTGEAKLKPGNVTIHGPSLLVVRPDMNKHSTELNIELQRLMDVVLRTVVIGL
PSTSRAVVARDDGKGLVETYTLCVEGYGLREVMATYGVNAKKTKSNNVYEVYTTLGIEAA
RSTIITEITKVMEGHGISVDFRHIELLASQMTSSGEVLGITRHGLAKIRESVFNLASFEK
TADHLFDAAYYGQTDCINGVSERIIMGMPAPIGTGMFKLVHDHGNVSNMELRSTLFHDLA
GE
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagaacaattcagacaaacggatcgagtaaaagatatttcacatgttactttc
ggagtggatagtgctgagagcattcagcaacaagctcacattcaaatatttgataaaaat
ttgtatagtcaagggggccaacgaattccaacgcaatatggagttatggatcgtagaatg
ggaacaagtgaaaaggatgcgaagtgtgagacttgcaataagggcttaacagattgtatg
ggtcattatggttatttagacttggccttacctgtatttcatgttggttatttcaagcat
attataaatattttacaaacaatatgtaaaacttgtggtcatgtaatgcttaaaccagca
gataaaaagatattaaccaggagaatgatgaatcctaatataacgtgcttacagaaaaaa
caattacgagcacaggttttagataaagctaaaaagttgtctaaatgcccaaattgtgag
gcaataaatggaatcgttaaaaaaaatcctggaggctttatgaaaattgtacatgacaaa
tttagaggaaagaaacccacagatacactagtaacatcatatttagattcgatggctgaa
gcaagggaagaaaatcgagatttgggtcaagttggaaattctgcattagctcaagatcta
aatcctgtggaagttttaaagttgttcaaaaaagttccagattcaaatatttttttattg
ggaatgaatactacacgaagtcgaccggcagatttgattttaacaagaatactagttcca
cccgtatgcataaggccatctgttgtatctgacatcaaagccggaacgactgaagatgat
ctaactatgaagctgtcagaaatccttttaataaatgaagtgataaaaaaacacatgcta
acgggtggtaaagtagaattgattcaagaggattgggatttcttgcaacttcactgtgct
ctctattttaatagtgaagttactggtgtaccattaggaatgcaaccaaaaaaatcatca
aaaggtttagttcagagattgaaaggaaagcaaggtcgatttcgaggtaatctttctgga
aaacgtgttgatttttcagcaagaactgtgatttctccagatccgaatttacaaattcac
caggttggggttcctgtatatgtggcaaaagtattgacatatcctgaacgagtacatcct
gctaatttgcaaagaatgaaacaactcgtgaaaaatggtccagatgtacatcctggagca
aactatgtacaacagaaaggcagcgatttcaaaaaatttttgcaatacggaaatcgtgca
aaaattgctcaagaactaaaatgcggtgatacagttgaaagacatctatgtgatggagat
gtggtattatttaaccggcaacctagtttgcacaaattaagtattatgtgtcacagagcc
aaagttcaaccccagagaacttttagatttaatgaatgtgtttgcactccttataatgct
gattttgatggcgacgaaatgaatttgcatcttccacaaactgaagaagcaagagcggag
gcccttgtcctaatgggaaatacatcaaacttagtaacacccagaaatggagagttaaca
attgcagcaacacaagattttatcacaggtggttatcttttaacacaaagagatgaattc
ttgactcatgagcaggctatgcaattggcagcatgctttcttgctggaccagatgcaaca
ttgcaaattgatttacctgagccagccatattgaaacctcgaagattatttacaggaaaa
caaatatttagtctattgttgaaacctaataaagaatgcccagttatggcaaatcttgtt
actagtggaagaaattacacaaaaaataaagacatgtgtgttcgtgattctttcgtaatt
ataagaaactcagaattactctgtggatcgatggataagaaaacattaggttctggcact
aagaattcaatattttacattctattgcgagattggggtgaagaagttgcttgtaaagct
atgtggcggttggccaggctagcttcttacttcttgatgaatcgtggattcagttttggc
attagcgatgtaacacctagtgccagacttattgaactcaaaaatatgttactagagcaa
ggatataaaaaatgcgacgaatatatagctgagatgaaaaaaggtactttgacatgtcag
cctggttgtactgctgaggaaacattggaatcaatgatgttgaaggaattgtcatcaata
agagaaacagctgctaaagcctgttttgctgaattgccaccgacaaatgccccacttatt
atggcacaatctggttccaaaggatccaatatcaacatatctcagatgatagcttgcgta
ggtcaacaggccataaatggaaagcgagttccaaatggttttgaagatcgtgcgttacct
cattttgagaaattttcaaaaaatccagcttctagaggttttgtggaaaatagtttcttt
tctggtcttactccgacagagttcttctttcacactatggctggcagagaaggtcttgtt
gatactgctgtcaaaacagctgagacgggttatcttcagagacgtttggttaaatgttta
gaagatatagtggtacattatgataacactgttcgaaatgctgttggtcaagtagtggaa
tttatttatggaggagatggattggatccagtttatatggaaggaaaggacagacctgtt
gatctgagtagagttctggaagatgttaaagccagaaatccatgtagagatgaaccaaca
ctaagatacaatgaaatattagattattataaagaacttattagcagttcagattatgat
tgtttaagtgaagattttaaaaaagaacaactagcatttgtccatgacgttgcagaaaac
gtacaaaaaattcaacaaaagtatggtcttaatttaatagtcactagagaattggagagg
ttaactaaagggcaattaaaagtatttatggaaacgtgtaaagtcaaattcttgcgtgct
aaaattgagccaggaacagctataggtgcactggctgcccagagtataggtgaacctggt
acacagatgacattgaaaacttttcactttgctggtgttgcttctatgaacattactcag
ggtgtacctcgtattttagaaataatcaatgcaagtaaaacgatctcaacacctgttata
tcagctgaattagataataatactgatatggaatttgcatttcgtgttaaaggtaggata
gagaagactacacttggagagatcacatcatttattcaagaagtttataggggtgatgag
tgttatttggtgattcggttagacattgatagaattcgtattttaagattagaattggat
gccaatactattaaatatgcgctctgtactggtgaagctaaattgaaacctggaaatgta
acaattcatggtccgtcattacttgttgtacggcctgacatgaataagcattcgacagaa
ttaaatatagaacttcaaaggctgatggatgttgtacttagaactgttgttataggtttg
ccttctacatccagagcagtagtggctagagatgatggaaagggtctcgttgaaacatac
acgctttgtgtcgaagggtatggtctacgagaggtcatggcgacttacggggtaaatgct
aagaaaaccaaatccaataatgtttatgaagtatacacaacattgggaatagaagcagcg
aggtctacaattataacagaaatcactaaagtcatggaaggacatggaattagtgtagat
tttagacatattgagctattggctagtcaaatgacaagttcaggagaagttttaggtatt
actagacatggtttagctaaaattcgagagtctgtattcaatttggcttcgttcgaaaaa
acagctgatcatctttttgatgcagcatattatggccaaactgactgcataaacggcgtt
tcagaaagaattattatgggtatgcctgctccaatcggcactggtatgttcaaattagta
catgatcatggtaatgtaagtaatatggaattgcgatctactttgtttcatgatctcgct
ggcgagtaa
DBGET
integrated database retrieval system
