Ctenocephalides felis (cat flea): 113385534
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Entry
113385534 CDS
T08578
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03013
Nucleocytoplasmic transport
cfel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113385534
09122 Translation
03013 Nucleocytoplasmic transport
113385534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113385534
03041 Spliceosome [BR:
cfel03041
]
113385534
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113385534
Spliceosome [BR:
cfel03041
]
Complex C
Other components
EJC/TREX
113385534
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113385534
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
CTB
Anti-RecBCD_p2
Motif
Other DBs
NCBI-GeneID:
113385534
NCBI-ProteinID:
XP_026479171
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MSINVNSETWKTWERSGKTEFLKQCKATIKDNARTPLLSKSGKLTGLGRAIYELFSNGIK
GTIRRDAVSSAVGELCHLHNDLPSIILDVLNILDAETALSDPEERQIFCQITKDTEKFLS
DKLLKERLEIDTLNEAGILSTSRTFYTKFIKIKTKLYYKQRKFNLYREESEGYAKLIVEL
NQEINDTITPKNILEVIKSLIGCFNLDPNRVLDVILESFECRPDQGNFFIPLIRSYMPDK
KIICEVLGFKFNIDPYNTPKSLYKVTALMLQHSVINLDDIYYWLSPDDKILCRQFEREMS
DAKEYVRRLNIISINKDKDKETDSNEQDKDNINDRYECNQKFNLCQALIEIGDWNNAHQL
CLKLPENYVIDQQPIAVALCKLIHYLIDQVYRSKCRIAKKINLKPVQHTMTNLGPKQAQT
LLELKTDAIPMIVFLGPSLHYDPVLASKILRICESALAEMDVNSLKLPKDNNNLYYEIFS
ILDSAILPALSFMDCNCCIAEEIWNIIKLYPYQYRYSLYGRWKNDTFQQYAKLLRRKGET
QKEIKHLVKRISKENIKPIGRSIGKLTHCSPGFFFDYVLLQIQIYDNLIIPIVDSLKYLT
SLSYDILGYCLIEALSSPDKQRMKHDGTSISLWLKSLASFCGAVFKKYNIELCGLLQYVA
NQLKAQKSTDLLILKEVVLKMACIDAAEELTEEQLEALAGGELLKGEAASFSQVRNTKKS
SLRLKEALNEHDLSVALCLLIAQQKYCVIYRETEYTHLKLVSKLYDQCQDTLVQFGSFLG
STYSVDEYVTRLPSIQMMLQEYHIHTDVAFFLARPMFTHAISQKYDQLRKTDPNPRKLTA
ALKQAKYAEACEHVMSPVVASVRTLHPARVWEDMSPQFLVTFWSLSMADLHVPVESYNRE
INRLKQLSLELLDQQDVKCXXNKKEQERHMALIEKLQDERKKQQEHVDKVMYRLKQEKDT
WFVSRSSKSAKNETITQFLQLCLFPRCIFTAXDAVFCAKFVHIIHSLKTVNFSTLLCYDR
NYLISDRGSYGTMWMKGPKLLSLSNDETNK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtctataaacgtaaatagtgaaacatggaaaacttgggagagatctggtaaaacagaa
tttttaaaacaatgtaaagctacaattaaagacaatgctaggacaccattattatcaaaa
tctggcaaactaactggcttgggccgagctatatatgagttattttcaaacggcatcaaa
ggcaccataaggagagatgcagttagttctgcagttggtgaattatgccatttgcacaat
gatttaccatcaattattttggatgttttaaatatattagatgcagaaacagcattaagt
gatccagaggaaaggcagattttctgtcaaattactaaagatactgaaaagtttctctct
gacaaactcttgaaagaacgtctagagattgatacattaaatgaagctgggattttgagc
acatctagaacattctatacaaaatttataaaaataaaaactaaattatattacaaacaa
agaaaattcaatttatatcgtgaagaaagtgaaggttatgctaaactgatagtagaattg
aatcaagaaattaatgatacaataaccccaaagaatattttggaagttattaagtcactg
attggttgttttaatttagatccaaatagagtattagatgttatattggagtcatttgaa
tgcaggccggatcaaggaaatttttttatacctttgataagatcatacatgccagataag
aaaattatctgtgaggtactaggtttcaaattcaatatagatccttataacactccgaag
tcgttgtataaagttacagctttgatgctacagcattctgtaataaatttggatgatatt
tattattggttgtcacctgatgataaaatattatgtagacaatttgaaagagaaatgtct
gatgccaaagagtatgttagaagattaaacataatatctatcaataaagataaagataaa
gaaactgactcgaatgaacaagataaagataatatcaatgatcgttatgaatgcaatcag
aagtttaatctctgccaggctttaatagaaattggtgattggaataatgcacatcaactt
tgcttgaaactgccagaaaattatgttattgatcaacaacctatagcagtagctctgtgt
aaattgattcattatctaattgaccaggtctatcgtagtaaatgtagaattgccaagaaa
atcaatttaaagccagtgcaacatacaatgactaatcttggtccaaaacaagcacaaaca
cttctagagctcaaaactgatgccataccaatgattgtatttttgggtccttctttacat
tatgatccagttttagcaagtaaaattttacgtatttgtgaatcagctctagctgaaatg
gatgttaattccttgaaacttcctaaagacaataataacttgtactatgagatattttca
atattggactcggctatactgccagctttatcatttatggattgtaattgttgtatcgca
gaggagatttggaatattattaaattatatccttatcaataccggtatagtttatatggt
agatggaaaaatgacacattccaacaatatgcaaaacttctacgaaggaagggagaaaca
caaaaggaaattaaacacttagtaaaaagaataagtaaagaaaatattaagcccattgga
agatcaattggcaagttgacacattgcagtcctggatttttctttgattatgtacttcta
caaatccagatatatgacaatctcattattcctatagttgattcactcaagtacctcaca
tcattatcttatgatatattaggttattgcctcatagaagcccttagttctccagataaa
caaaggatgaaacacgatggcacatcaatttcactctggttgaagagtttagcttcattt
tgtggggctgtctttaaaaaatataatattgaattgtgtggattattgcaatatgttgca
aatcaattgaaagcacaaaaaagtactgatttgctgatcttgaaagaagttgtcttaaaa
atggcctgtattgatgccgcagaagaattgactgaagaacaattagaagcacttgctgga
ggtgaattactcaaaggagaggctgcatctttcagtcaagtacgaaacaccaaaaaatca
tcattgcgcttgaaagaggcattgaatgaacatgatttatctgtggcattgtgtttacta
attgcacagcagaaatattgtgttatatatagagaaacagagtatacacatttgaaactt
gttagcaagctctatgatcaatgtcaggatacgttagtgcaatttggaagttttcttggt
tccacatattcagttgatgaatatgtaactcgactaccttcaatacaaatgatgttgcaa
gaatatcacatacacactgatgtagctttctttttagcacggcccatgtttactcatgcc
attagtcaaaaatatgatcaattgcgtaaaactgatccaaatccacgcaaattaacagcg
gctttgaaacaagcaaaatatgcagaagcatgtgaacatgttatgtcaccggtagttgca
tccgttcggacattgcatccagcaagagtttgggaagatatgtcacctcaatttctcgtt
acattttggtctttaagtatggcagatttacatgtgcctgtggagagctataatagagaa
attaatagattgaagcagttgtcacttgaattgttggatcaacaagatgtaaagtgctaa
taaaataaaaaggaacaagaacgccatatggctcttattgaaaaattgcaagacgagcgc
aagaagcagcaagaacatgttgataaagttatgtatcgactgaagcaagaaaaagataca
tggtttgtttcaagatctagtaaatcggcgaaaaatgaaacaattactcaatttttgcag
ttgtgcttgtttccgagatgtattttcactgcanatgatgctgtcttttgtgcaaagttt
gttcatatcatccacagcttgaaaacagtgaacttttcaacattattatgttacgataga
aactacttgatatcagatcgaggcagttatggaactatgtggatgaaagggccaaagctt
ttatcactgagcaacgatgaaaccaacaaataa
DBGET
integrated database retrieval system
