Ctenocephalides felis (cat flea): 113386847
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Entry
113386847 CDS
T08578
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113386847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113386847
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113386847
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113386847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
113386847
NCBI-ProteinID:
XP_026480395
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MSQNVCIKLASERVDTAIDNSTFNVRLYTPGEIIVQQGGYMRGHGTYTEDDYLKASVAGV
VEQVNKLISVKPLKSRYVGEIGDVIVGRITEVQQKRWKVDTNSRLDSVLLLSSVNLPGGE
LRRRSVEDEQAMRRYLQEGDLISAEVQNVYGDGSLSLHTRSLKYGKLSQGIMVKVFPSLV
KRRKNHFHNLPCGASVILGNNGFIWICPTINQDVGGAGGFTQNLEEVVPRDDREMIARIR
NVILALAHFKLQLCDTSITYAVEESISANYTPRDLITPEYMLDVVIRTKHRLQELNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaatgtatgcataaaattagcttctgaacgtgtggatacagcaattgataat
agtacatttaatgtacgtctatatacacctggggaaataattgttcaacaaggaggttat
atgcgtggccatggaacttacactgaagatgactacttaaaagcttcagttgctggagtt
gtagaacaagttaataaattgatttctgtgaaacctctgaaaagcagatacgttggtgaa
attggtgatgttatagttggacgtatcacagaagttcaacaaaaaagatggaaagtagat
acaaactccagacttgactctgttttactattgtcatcggttaacttgccaggaggagag
ctgcgtagacgttctgttgaagatgaacaagctatgagacgttatttgcaagaaggtgat
cttatcagtgcagaagttcaaaatgtttatggtgatggttcgctatcactgcacacaaga
agtttaaaatatggaaagttatctcaaggaattatggttaaagtttttccatctctagtg
aaacggcgaaagaatcattttcataatttaccctgtggtgcttctgttatcctcggaaac
aatggatttatatggatatgtccaacaatcaatcaagatgttggtggtgctggtggtttt
acacaaaatttagaggaggtggttccaagagatgacagagaaatgattgcccgaattaga
aatgttattttagctttggcgcatttcaagcttcagttgtgtgatactagtataacctat
gcagtggaagaatctatatctgcaaattatactcctagagatttaatcacaccggaatat
atgttagatgttgtgataagaactaaacacagattacaagaattaaatgagtga
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